Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SND1-IT1Q9HBX3 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 AP3S2-216ENST00000617003 1561 ntBASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 UXT-AS1-201ENST00000590504 1525 ntBASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 RNA5SP416-201ENST00000516838 111 ntBASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
SND1-IT1Q9HBX3 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SND1-IT1Q9HBX3 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms