Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 AC134312.5-201ENST00000568031 1313 ntBASIC14.3□□□□□ -0.12
BRF2Q9HAW0 AC152010.1-201ENST00000415779 2006 ntBASIC14.3□□□□□ -0.12
BRF2Q9HAW0 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 AL136172.1-201ENST00000598590 1394 ntBASIC14.3□□□□□ -0.12
BRF2Q9HAW0 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
BRF2Q9HAW0 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 RN7SKP230-201ENST00000365642 335 ntBASIC14.29□□□□□ -0.12
BRF2Q9HAW0 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 AP006294.1-201ENST00000415407 339 ntBASIC14.29□□□□□ -0.12
BRF2Q9HAW0 POM121L8P-201ENST00000417732 1281 ntBASIC14.29□□□□□ -0.12
BRF2Q9HAW0 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 POM121L9P-203ENST00000441984 1285 ntBASIC14.29□□□□□ -0.12
BRF2Q9HAW0 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 AC068587.3-201ENST00000526613 355 ntBASIC14.29□□□□□ -0.12
BRF2Q9HAW0 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 MIR5189-201ENST00000577370 114 ntBASIC14.29□□□□□ -0.12
BRF2Q9HAW0 ENPP7P14-201ENST00000621765 1040 ntBASIC14.29□□□□□ -0.12
BRF2Q9HAW0 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BRF2Q9HAW0 AC027601.5-201ENST00000624065 2482 ntBASIC14.29□□□□□ -0.12
BRF2Q9HAW0 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 AC139749.1-202ENST00000617529 3139 ntBASIC14.28□□□□□ -0.12
BRF2Q9HAW0 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 MSTO2P-201ENST00000314835 1709 ntBASIC14.28□□□□□ -0.12
BRF2Q9HAW0 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 AC098614.1-201ENST00000368528 745 ntBASIC14.28□□□□□ -0.12
BRF2Q9HAW0 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
BRF2Q9HAW0 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms