Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 AC041040.2-201ENST00000622926 2899 ntBASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC17.9■□□□□ 0.46
UPF3BQ9BZI7 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
UPF3BQ9BZI7 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
UPF3BQ9BZI7 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC17.89■□□□□ 0.46
UPF3BQ9BZI7 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
UPF3BQ9BZI7 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
UPF3BQ9BZI7 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
UPF3BQ9BZI7 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 SOCS2P1-201ENST00000417727 557 ntBASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 AC245100.3-201ENST00000441281 285 ntBASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 MYCLP2-201ENST00000449268 967 ntBASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 ELK1P1-201ENST00000485699 580 ntBASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 TKT-201ENST00000296289 1931 ntTSL 5 BASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 OS9-204ENST00000389146 2091 ntTSL 2 BASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 AC006504.5-208ENST00000588784 2401 ntBASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
UPF3BQ9BZI7 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 CICP4-201ENST00000447359 2812 ntBASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 API5-211ENST00000534695 560 ntTSL 5 BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 WASH4P-201ENST00000564273 1246 ntBASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 CTBP2P3-201ENST00000585629 1255 ntBASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms