Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRIM54Q9BYV2 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.83□□□□□ -0.03
TRIM54Q9BYV2 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TRIM54Q9BYV2 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.83□□□□□ -0.03
TRIM54Q9BYV2 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRIM54Q9BYV2 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRIM54Q9BYV2 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.83□□□□□ -0.03
TRIM54Q9BYV2 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRIM54Q9BYV2 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.83□□□□□ -0.03
TRIM54Q9BYV2 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TRIM54Q9BYV2 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
TRIM54Q9BYV2 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM54Q9BYV2 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM54Q9BYV2 LRRC59-203ENST00000576448 1531 ntBASIC14.83□□□□□ -0.04
TRIM54Q9BYV2 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM54Q9BYV2 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM54Q9BYV2 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM54Q9BYV2 ACKR1-201ENST00000368121 1240 ntBASIC14.83□□□□□ -0.04
TRIM54Q9BYV2 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM54Q9BYV2 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
TRIM54Q9BYV2 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.83□□□□□ -0.04
TRIM54Q9BYV2 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM54Q9BYV2 AC098850.1-201ENST00000419919 790 ntBASIC14.83□□□□□ -0.04
TRIM54Q9BYV2 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.83□□□□□ -0.04
TRIM54Q9BYV2 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.83□□□□□ -0.04
TRIM54Q9BYV2 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.83□□□□□ -0.04
TRIM54Q9BYV2 KRT18P25-201ENST00000508931 1278 ntBASIC14.83□□□□□ -0.04
TRIM54Q9BYV2 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
TRIM54Q9BYV2 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM54Q9BYV2 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
TRIM54Q9BYV2 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM54Q9BYV2 AC008494.3-201ENST00000606615 944 ntBASIC14.83□□□□□ -0.04
TRIM54Q9BYV2 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.83□□□□□ -0.04
TRIM54Q9BYV2 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.83□□□□□ -0.04
TRIM54Q9BYV2 AP005019.2-201ENST00000615104 511 ntBASIC14.83□□□□□ -0.04
TRIM54Q9BYV2 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.83□□□□□ -0.04
TRIM54Q9BYV2 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM54Q9BYV2 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.83□□□□□ -0.04
TRIM54Q9BYV2 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM54Q9BYV2 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
TRIM54Q9BYV2 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM54Q9BYV2 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
TRIM54Q9BYV2 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM54Q9BYV2 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM54Q9BYV2 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.83□□□□□ -0.04
TRIM54Q9BYV2 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TRIM54Q9BYV2 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.83□□□□□ -0.04
TRIM54Q9BYV2 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
TRIM54Q9BYV2 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 AC018442.1-201ENST00000421439 2061 ntBASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 AP001063.1-201ENST00000568332 529 ntBASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 CU634019.7-201ENST00000624153 1185 ntBASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 FP236241.2-201ENST00000624906 1185 ntBASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM54Q9BYV2 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms