Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RSPO3Q9BXY4 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 AC139712.1-201ENST00000378256 1875 ntBASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 KRT8P24-201ENST00000560290 1559 ntBASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 AL590440.2-201ENST00000641973 1595 ntBASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 AC130686.1-201ENST00000622936 2466 ntBASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 AL033527.5-201ENST00000641382 801 ntBASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO3Q9BXY4 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 AC012441.1-201ENST00000446669 685 ntBASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 BX088702.1-201ENST00000610784 235 ntBASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.66□□□□□ -0.22
RSPO3Q9BXY4 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms