Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 AC097493.3-201ENST00000509725 367 ntBASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 AC107373.2-201ENST00000607735 490 ntBASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 AL391069.4-201ENST00000609583 481 ntBASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 KRT8P14-201ENST00000414254 1442 ntBASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 DRD5P1-201ENST00000456605 1438 ntBASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
HDHD3Q9BSH5 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 AGGF1P1-201ENST00000509500 2073 ntBASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 AL353779.1-201ENST00000434793 351 ntBASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 MEIS3P1-201ENST00000495167 958 ntBASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 ZNF890P-202ENST00000530367 1156 ntBASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 AL590560.3-201ENST00000623350 461 ntBASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HDHD3Q9BSH5 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms