Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 C1R-201ENST00000535233 2211 ntTSL 2 BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 AC055811.4-201ENST00000624039 1754 ntBASIC16.93■□□□□ 0.3
SMARCE1Q969G3 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC16.93■□□□□ 0.3
SMARCE1Q969G3 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 AL354702.1-201ENST00000442006 1960 ntBASIC16.93■□□□□ 0.3
SMARCE1Q969G3 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC16.93■□□□□ 0.3
SMARCE1Q969G3 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 TPRX2P-201ENST00000535362 881 ntBASIC16.92■□□□□ 0.3
SMARCE1Q969G3 AC023310.3-201ENST00000557027 670 ntBASIC16.92■□□□□ 0.3
SMARCE1Q969G3 AC100756.1-201ENST00000562736 682 ntBASIC16.92■□□□□ 0.3
SMARCE1Q969G3 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 AC138749.3-201ENST00000567691 622 ntBASIC16.92■□□□□ 0.3
SMARCE1Q969G3 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 AC116165.1-201ENST00000611806 668 ntBASIC16.92■□□□□ 0.3
SMARCE1Q969G3 AC004790.1-201ENST00000612686 536 ntBASIC16.92■□□□□ 0.3
SMARCE1Q969G3 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC16.92■□□□□ 0.3
SMARCE1Q969G3 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SMARCE1Q969G3 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC16.91■□□□□ 0.3
SMARCE1Q969G3 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCE1Q969G3 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMARCE1Q969G3 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.91■□□□□ 0.3
SMARCE1Q969G3 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.91■□□□□ 0.3
SMARCE1Q969G3 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms