Protein–RNA interactions for Protein: Q8WWF3

SSMEM1, Serine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSMEM1Q8WWF3 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 AC119751.2-201ENST00000504529 210 ntBASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 AP001889.1-201ENST00000525414 633 ntBASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 SNX29P1-201ENST00000548357 1007 ntBASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 AC079316.1-201ENST00000548397 411 ntBASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 AC015910.1-201ENST00000579400 975 ntBASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 MIR4259-201ENST00000584466 101 ntBASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 AL354718.3-201ENST00000616414 581 ntBASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 CR382287.1-201ENST00000623954 586 ntBASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 AC007191.1-201ENST00000623179 2995 ntBASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSMEM1Q8WWF3 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 AL390755.1-201ENST00000623716 2027 ntBASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 DRD5P1-201ENST00000456605 1438 ntBASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 FAM21FP-201ENST00000426241 1131 ntBASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 RPL7P3-201ENST00000441388 714 ntBASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 FO681548.1-201ENST00000455617 1132 ntBASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 CLUHP6-201ENST00000580789 941 ntBASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 AC005252.2-201ENST00000624630 1141 ntBASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 AC087386.2-201ENST00000623212 4637 ntBASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.49□□□□□ -0.41
SSMEM1Q8WWF3 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms