Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 IGHV3-71-201ENST00000523324 359 ntBASIC15.29■□□□□ 0.04
PTCD2Q8WV60 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 AL512343.1-201ENST00000605837 169 ntBASIC15.29■□□□□ 0.04
PTCD2Q8WV60 AL008721.1-201ENST00000609964 604 ntBASIC15.29■□□□□ 0.04
PTCD2Q8WV60 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTCD2Q8WV60 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 AC140479.7-201ENST00000636301 2332 ntBASIC15.28■□□□□ 0.04
PTCD2Q8WV60 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 ACTG1P3-201ENST00000431775 1114 ntBASIC15.28■□□□□ 0.04
PTCD2Q8WV60 ATP5G2P4-201ENST00000442175 420 ntBASIC15.28■□□□□ 0.04
PTCD2Q8WV60 GPR53P-205ENST00000457298 1084 ntBASIC15.28■□□□□ 0.04
PTCD2Q8WV60 AC093433.1-201ENST00000458048 571 ntBASIC15.28■□□□□ 0.04
PTCD2Q8WV60 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 SLC25A47P1-201ENST00000531577 414 ntBASIC15.28■□□□□ 0.04
PTCD2Q8WV60 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 MIR4259-201ENST00000584466 101 ntBASIC15.28■□□□□ 0.04
PTCD2Q8WV60 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 AC025165.5-201ENST00000602802 578 ntBASIC15.28■□□□□ 0.04
PTCD2Q8WV60 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTCD2Q8WV60 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms