Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 AC005089.1-201ENST00000619486 2241 ntBASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 AC087386.2-201ENST00000623212 4637 ntBASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 AC113367.3-201ENST00000508316 1912 ntBASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 DMBT1P1-203ENST00000636837 4628 ntBASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 ADAMTS7P1-201ENST00000613213 4793 ntBASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 RNU1-114P-201ENST00000365297 166 ntBASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 AC114812.1-204ENST00000449669 728 ntBASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 AC022616.1-201ENST00000518688 554 ntBASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 TMEM261P1-201ENST00000604899 340 ntBASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 PRSS30P-206ENST00000641773 873 ntBASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 LRRC59-203ENST00000576448 1531 ntBASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAF3IP1Q8TDR0 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF3IP1Q8TDR0 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF3IP1Q8TDR0 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF3IP1Q8TDR0 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF3IP1Q8TDR0 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF3IP1Q8TDR0 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF3IP1Q8TDR0 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRAF3IP1Q8TDR0 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
TRAF3IP1Q8TDR0 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF3IP1Q8TDR0 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF3IP1Q8TDR0 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAF3IP1Q8TDR0 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAF3IP1Q8TDR0 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TRAF3IP1Q8TDR0 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF3IP1Q8TDR0 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRAF3IP1Q8TDR0 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAF3IP1Q8TDR0 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAF3IP1Q8TDR0 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRAF3IP1Q8TDR0 AC007191.1-201ENST00000623179 2995 ntBASIC15.65■□□□□ 0.1
TRAF3IP1Q8TDR0 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF3IP1Q8TDR0 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF3IP1Q8TDR0 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAF3IP1Q8TDR0 AC098850.1-201ENST00000419919 790 ntBASIC15.65■□□□□ 0.1
TRAF3IP1Q8TDR0 BCRP1-201ENST00000444246 691 ntBASIC15.65■□□□□ 0.1
TRAF3IP1Q8TDR0 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAF3IP1Q8TDR0 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.65■□□□□ 0.1
TRAF3IP1Q8TDR0 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.65■□□□□ 0.1
TRAF3IP1Q8TDR0 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
TRAF3IP1Q8TDR0 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAF3IP1Q8TDR0 CHCHD2P3-201ENST00000603038 451 ntBASIC15.65■□□□□ 0.1
TRAF3IP1Q8TDR0 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF3IP1Q8TDR0 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAF3IP1Q8TDR0 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAF3IP1Q8TDR0 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.65■□□□□ 0.1
TRAF3IP1Q8TDR0 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAF3IP1Q8TDR0 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TRAF3IP1Q8TDR0 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TRAF3IP1Q8TDR0 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF3IP1Q8TDR0 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF3IP1Q8TDR0 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAF3IP1Q8TDR0 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms