Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KLHDC9Q8NEP7 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC16.21■□□□□ 0.19
KLHDC9Q8NEP7 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KLHDC9Q8NEP7 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KLHDC9Q8NEP7 KRT8P1-201ENST00000557533 1207 ntBASIC16.21■□□□□ 0.19
KLHDC9Q8NEP7 C2orf69P1-201ENST00000563532 1093 ntBASIC16.21■□□□□ 0.19
KLHDC9Q8NEP7 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KLHDC9Q8NEP7 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC16.21■□□□□ 0.19
KLHDC9Q8NEP7 DBP-202ENST00000593500 712 ntTSL 2 BASIC16.21■□□□□ 0.19
KLHDC9Q8NEP7 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
KLHDC9Q8NEP7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.21■□□□□ 0.19
KLHDC9Q8NEP7 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KLHDC9Q8NEP7 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.21■□□□□ 0.19
KLHDC9Q8NEP7 SSR4P1-203ENST00000599569 2260 ntBASIC16.21■□□□□ 0.19
KLHDC9Q8NEP7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
KLHDC9Q8NEP7 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
KLHDC9Q8NEP7 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
KLHDC9Q8NEP7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
KLHDC9Q8NEP7 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.21■□□□□ 0.18
KLHDC9Q8NEP7 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
KLHDC9Q8NEP7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.21■□□□□ 0.18
KLHDC9Q8NEP7 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
KLHDC9Q8NEP7 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
KLHDC9Q8NEP7 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
KLHDC9Q8NEP7 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
KLHDC9Q8NEP7 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.2■□□□□ 0.18
KLHDC9Q8NEP7 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.2■□□□□ 0.18
KLHDC9Q8NEP7 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.2■□□□□ 0.18
KLHDC9Q8NEP7 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
KLHDC9Q8NEP7 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.2■□□□□ 0.18
KLHDC9Q8NEP7 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KLHDC9Q8NEP7 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.2■□□□□ 0.18
KLHDC9Q8NEP7 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
KLHDC9Q8NEP7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
KLHDC9Q8NEP7 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.2■□□□□ 0.18
KLHDC9Q8NEP7 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
KLHDC9Q8NEP7 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KLHDC9Q8NEP7 GUSBP10-201ENST00000417412 665 ntBASIC16.2■□□□□ 0.18
KLHDC9Q8NEP7 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KLHDC9Q8NEP7 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC16.2■□□□□ 0.18
KLHDC9Q8NEP7 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
KLHDC9Q8NEP7 REEP5-205ENST00000504247 480 ntTSL 5 BASIC16.2■□□□□ 0.18
KLHDC9Q8NEP7 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC16.2■□□□□ 0.18
KLHDC9Q8NEP7 MIR5196-201ENST00000578146 115 ntBASIC16.2■□□□□ 0.18
KLHDC9Q8NEP7 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC16.2■□□□□ 0.18
KLHDC9Q8NEP7 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
KLHDC9Q8NEP7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.2■□□□□ 0.18
KLHDC9Q8NEP7 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.2■□□□□ 0.18
KLHDC9Q8NEP7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KLHDC9Q8NEP7 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KLHDC9Q8NEP7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KLHDC9Q8NEP7 AP002353.1-201ENST00000528257 1599 ntBASIC16.2■□□□□ 0.18
KLHDC9Q8NEP7 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC16.2■□□□□ 0.18
KLHDC9Q8NEP7 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC16.2■□□□□ 0.18
KLHDC9Q8NEP7 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.2■□□□□ 0.18
KLHDC9Q8NEP7 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC16.2■□□□□ 0.18
KLHDC9Q8NEP7 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.2■□□□□ 0.18
KLHDC9Q8NEP7 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
KLHDC9Q8NEP7 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KLHDC9Q8NEP7 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
KLHDC9Q8NEP7 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KLHDC9Q8NEP7 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC16.19■□□□□ 0.18
KLHDC9Q8NEP7 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KLHDC9Q8NEP7 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
KLHDC9Q8NEP7 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KLHDC9Q8NEP7 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KLHDC9Q8NEP7 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KLHDC9Q8NEP7 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KLHDC9Q8NEP7 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
KLHDC9Q8NEP7 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
KLHDC9Q8NEP7 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KLHDC9Q8NEP7 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KLHDC9Q8NEP7 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
KLHDC9Q8NEP7 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.19■□□□□ 0.18
KLHDC9Q8NEP7 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
KLHDC9Q8NEP7 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KLHDC9Q8NEP7 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
KLHDC9Q8NEP7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KLHDC9Q8NEP7 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KLHDC9Q8NEP7 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KLHDC9Q8NEP7 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KLHDC9Q8NEP7 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
KLHDC9Q8NEP7 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KLHDC9Q8NEP7 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC16.19■□□□□ 0.18
KLHDC9Q8NEP7 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.19■□□□□ 0.18
KLHDC9Q8NEP7 AL512306.1-201ENST00000432698 848 ntBASIC16.19■□□□□ 0.18
KLHDC9Q8NEP7 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KLHDC9Q8NEP7 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
KLHDC9Q8NEP7 RNA5SP417-201ENST00000516459 108 ntBASIC16.19■□□□□ 0.18
KLHDC9Q8NEP7 ALG1L13P-202ENST00000519320 584 ntBASIC16.19■□□□□ 0.18
KLHDC9Q8NEP7 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC16.19■□□□□ 0.18
KLHDC9Q8NEP7 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC16.19■□□□□ 0.18
KLHDC9Q8NEP7 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC16.19■□□□□ 0.18
KLHDC9Q8NEP7 AC138466.5-201ENST00000624002 808 ntBASIC16.19■□□□□ 0.18
KLHDC9Q8NEP7 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC16.19■□□□□ 0.18
KLHDC9Q8NEP7 LINC00431-202ENST00000636375 159 ntBASIC16.19■□□□□ 0.18
KLHDC9Q8NEP7 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.19■□□□□ 0.18
KLHDC9Q8NEP7 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KLHDC9Q8NEP7 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KLHDC9Q8NEP7 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms