Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 FAM58BP-201ENST00000439056 645 ntBASIC15.36■□□□□ 0.05
SIX5Q8N196 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
SIX5Q8N196 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.36■□□□□ 0.05
SIX5Q8N196 AP002803.1-201ENST00000528836 498 ntBASIC15.36■□□□□ 0.05
SIX5Q8N196 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC15.36■□□□□ 0.05
SIX5Q8N196 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
SIX5Q8N196 MIR6842-201ENST00000612539 65 ntBASIC15.36■□□□□ 0.05
SIX5Q8N196 YRDCP1-201ENST00000621419 643 ntBASIC15.36■□□□□ 0.05
SIX5Q8N196 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC15.36■□□□□ 0.05
SIX5Q8N196 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SIX5Q8N196 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SIX5Q8N196 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SIX5Q8N196 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SIX5Q8N196 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
SIX5Q8N196 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.36■□□□□ 0.05
SIX5Q8N196 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
SIX5Q8N196 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SIX5Q8N196 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.36■□□□□ 0.05
SIX5Q8N196 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SIX5Q8N196 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.36■□□□□ 0.05
SIX5Q8N196 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.36■□□□□ 0.05
SIX5Q8N196 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
SIX5Q8N196 AC079328.2-201ENST00000561241 3354 ntBASIC15.36■□□□□ 0.05
SIX5Q8N196 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
SIX5Q8N196 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
SIX5Q8N196 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC15.36■□□□□ 0.05
SIX5Q8N196 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.36■□□□□ 0.05
SIX5Q8N196 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
SIX5Q8N196 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SIX5Q8N196 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SIX5Q8N196 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SIX5Q8N196 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SIX5Q8N196 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SIX5Q8N196 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SIX5Q8N196 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SIX5Q8N196 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
SIX5Q8N196 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SIX5Q8N196 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SIX5Q8N196 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.35■□□□□ 0.05
SIX5Q8N196 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SIX5Q8N196 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SIX5Q8N196 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.35■□□□□ 0.05
SIX5Q8N196 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SIX5Q8N196 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SIX5Q8N196 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SIX5Q8N196 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SIX5Q8N196 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.35■□□□□ 0.05
SIX5Q8N196 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
SIX5Q8N196 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SIX5Q8N196 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SIX5Q8N196 RN7SKP175-201ENST00000408472 289 ntBASIC15.35■□□□□ 0.05
SIX5Q8N196 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.35■□□□□ 0.05
SIX5Q8N196 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC15.35■□□□□ 0.05
SIX5Q8N196 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC15.35■□□□□ 0.05
SIX5Q8N196 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC15.35■□□□□ 0.05
SIX5Q8N196 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC15.35■□□□□ 0.05
SIX5Q8N196 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.35■□□□□ 0.05
SIX5Q8N196 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
SIX5Q8N196 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
SIX5Q8N196 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC15.35■□□□□ 0.05
SIX5Q8N196 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC15.35■□□□□ 0.05
SIX5Q8N196 GMFG-209ENST00000600322 622 ntTSL 5 BASIC15.35■□□□□ 0.05
SIX5Q8N196 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC15.35■□□□□ 0.05
SIX5Q8N196 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SIX5Q8N196 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
SIX5Q8N196 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SIX5Q8N196 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SIX5Q8N196 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
SIX5Q8N196 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SIX5Q8N196 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SIX5Q8N196 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SIX5Q8N196 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SIX5Q8N196 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SIX5Q8N196 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
SIX5Q8N196 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SIX5Q8N196 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SIX5Q8N196 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC15.35■□□□□ 0.05
SIX5Q8N196 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SIX5Q8N196 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.35■□□□□ 0.05
SIX5Q8N196 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.35■□□□□ 0.05
SIX5Q8N196 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.35■□□□□ 0.05
SIX5Q8N196 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.35■□□□□ 0.05
SIX5Q8N196 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SIX5Q8N196 PCDHA14-201ENST00000506751 2298 ntBASIC15.34■□□□□ 0.05
SIX5Q8N196 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SIX5Q8N196 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SIX5Q8N196 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SIX5Q8N196 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SIX5Q8N196 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SIX5Q8N196 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SIX5Q8N196 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SIX5Q8N196 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SIX5Q8N196 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.34■□□□□ 0.05
SIX5Q8N196 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
SIX5Q8N196 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SIX5Q8N196 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.34■□□□□ 0.05
SIX5Q8N196 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SIX5Q8N196 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SIX5Q8N196 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SIX5Q8N196 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms