Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRTM4Q86VH4 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRTM4Q86VH4 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRTM4Q86VH4 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.67□□□□□ -0.06
LRRTM4Q86VH4 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRTM4Q86VH4 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRTM4Q86VH4 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.67□□□□□ -0.06
LRRTM4Q86VH4 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.67□□□□□ -0.06
LRRTM4Q86VH4 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRTM4Q86VH4 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LRRTM4Q86VH4 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.67□□□□□ -0.06
LRRTM4Q86VH4 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.67□□□□□ -0.06
LRRTM4Q86VH4 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
LRRTM4Q86VH4 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.67□□□□□ -0.06
LRRTM4Q86VH4 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRTM4Q86VH4 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LRRTM4Q86VH4 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 MIR326-201ENST00000362220 95 ntBASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 MIR1908-201ENST00000410394 80 ntBASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 AC092658.1-201ENST00000505836 891 ntBASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 AC131206.1-201ENST00000538078 1211 ntBASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRRTM4Q86VH4 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 CICP23-201ENST00000605013 2741 ntBASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 OR2I1P-209ENST00000641730 5365 ntBASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 ACTBP11-201ENST00000436287 1126 ntBASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 GOLGA2P4-201ENST00000441462 777 ntBASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 PFN1P12-201ENST00000455938 534 ntBASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 AL358472.3-201ENST00000608147 415 ntBASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 AC091271.1-201ENST00000611877 1162 ntBASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 AL136301.1-201ENST00000615830 422 ntBASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 AP001002.3-201ENST00000623482 206 ntBASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.65□□□□□ -0.06
LRRTM4Q86VH4 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms