Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 GDNF-207ENST00000515058 764 ntTSL 5 BASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 SRP14-204ENST00000558720 780 ntTSL 2 BASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 HMGB1P24-201ENST00000611897 328 ntBASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 AHCYP4-201ENST00000419201 1315 ntBASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 AC011462.4-201ENST00000616866 449 ntBASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 AC073347.1-201ENST00000421633 2643 ntBASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
VPS13BQ7Z7G8 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 AC092135.3-201ENST00000624151 1846 ntBASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 RNVU1-8-201ENST00000364272 125 ntBASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 AC092570.1-201ENST00000414446 469 ntBASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 AC018638.5-201ENST00000450885 754 ntBASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 BCL2L12P1-201ENST00000508390 733 ntBASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 AP005212.2-201ENST00000584979 510 ntBASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 NAV1-210ENST00000593583 726 ntBASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 MIR6720-201ENST00000611664 98 ntBASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 GEMIN8P4-201ENST00000380526 729 ntBASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 PPIA-208ENST00000489459 907 ntTSL 2 BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 AL590235.1-201ENST00000564650 861 ntBASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 PPIA-210ENST00000620047 827 ntTSL 5 BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC8.94□□□□□ -0.98
VPS13BQ7Z7G8 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms