Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHC4Q6S5L8 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SHC4Q6S5L8 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.83■□□□□ 0.28
SHC4Q6S5L8 AL138709.1-201ENST00000614840 1693 ntBASIC16.83■□□□□ 0.28
SHC4Q6S5L8 AC145423.3-201ENST00000615987 467 ntBASIC16.83■□□□□ 0.28
SHC4Q6S5L8 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHC4Q6S5L8 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC16.83■□□□□ 0.28
SHC4Q6S5L8 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.83■□□□□ 0.28
SHC4Q6S5L8 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHC4Q6S5L8 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHC4Q6S5L8 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
SHC4Q6S5L8 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHC4Q6S5L8 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHC4Q6S5L8 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHC4Q6S5L8 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 AC011474.4-201ENST00000623523 2076 ntBASIC16.82■□□□□ 0.28
SHC4Q6S5L8 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 MIR4745-201ENST00000577608 62 ntBASIC16.82■□□□□ 0.28
SHC4Q6S5L8 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 WARS-203ENST00000358655 2466 ntTSL 2 BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 AC011498.7-201ENST00000624986 2027 ntBASIC16.82■□□□□ 0.28
SHC4Q6S5L8 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
SHC4Q6S5L8 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC4Q6S5L8 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC4Q6S5L8 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC4Q6S5L8 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC4Q6S5L8 AC015688.4-201ENST00000580780 1647 ntBASIC16.81■□□□□ 0.28
SHC4Q6S5L8 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC4Q6S5L8 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SHC4Q6S5L8 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SHC4Q6S5L8 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHC4Q6S5L8 MST1P2-201ENST00000457982 2291 ntBASIC16.81■□□□□ 0.28
SHC4Q6S5L8 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC4Q6S5L8 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SHC4Q6S5L8 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC4Q6S5L8 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHC4Q6S5L8 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.81■□□□□ 0.28
SHC4Q6S5L8 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SHC4Q6S5L8 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC4Q6S5L8 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHC4Q6S5L8 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC16.81■□□□□ 0.28
SHC4Q6S5L8 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC4Q6S5L8 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC16.81■□□□□ 0.28
SHC4Q6S5L8 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC4Q6S5L8 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC4Q6S5L8 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC4Q6S5L8 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.81■□□□□ 0.28
SHC4Q6S5L8 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.81■□□□□ 0.28
SHC4Q6S5L8 AC245100.3-201ENST00000441281 285 ntBASIC16.81■□□□□ 0.28
SHC4Q6S5L8 AC012441.1-201ENST00000446669 685 ntBASIC16.81■□□□□ 0.28
SHC4Q6S5L8 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.81■□□□□ 0.28
SHC4Q6S5L8 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHC4Q6S5L8 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.81■□□□□ 0.28
SHC4Q6S5L8 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.81■□□□□ 0.28
SHC4Q6S5L8 AP001002.3-201ENST00000623482 206 ntBASIC16.81■□□□□ 0.28
SHC4Q6S5L8 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHC4Q6S5L8 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SHC4Q6S5L8 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHC4Q6S5L8 AC104581.4-201ENST00000623126 3052 ntBASIC16.81■□□□□ 0.28
SHC4Q6S5L8 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHC4Q6S5L8 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms