Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
LPCAT4Q643R3 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 TARDBPP1-201ENST00000442013 1203 ntBASIC14.14□□□□□ -0.15
LPCAT4Q643R3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 AC026979.3-201ENST00000607315 403 ntBASIC14.14□□□□□ -0.15
LPCAT4Q643R3 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LPCAT4Q643R3 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 AL157414.3-201ENST00000624276 1954 ntBASIC14.13□□□□□ -0.15
LPCAT4Q643R3 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 CRYGEP-201ENST00000412192 528 ntBASIC14.13□□□□□ -0.15
LPCAT4Q643R3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 AC018712.1-201ENST00000455767 687 ntBASIC14.13□□□□□ -0.15
LPCAT4Q643R3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 AL157996.1-201ENST00000624684 2299 ntBASIC14.13□□□□□ -0.15
LPCAT4Q643R3 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms