Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 TCAM1P-207ENST00000485295 1537 ntBASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
LINC00242Q5T6M2 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
LINC00242Q5T6M2 TCAF1P1-201ENST00000414990 2232 ntBASIC10.27□□□□□ -0.76
LINC00242Q5T6M2 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
LINC00242Q5T6M2 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
LINC00242Q5T6M2 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
LINC00242Q5T6M2 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
LINC00242Q5T6M2 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
LINC00242Q5T6M2 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
LINC00242Q5T6M2 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
LINC00242Q5T6M2 RET-205ENST00000615310 4337 ntTSL 5 BASIC10.27□□□□□ -0.76
LINC00242Q5T6M2 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
LINC00242Q5T6M2 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.76
LINC00242Q5T6M2 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
LINC00242Q5T6M2 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.76
LINC00242Q5T6M2 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC10.27□□□□□ -0.76
LINC00242Q5T6M2 AC131212.3-201ENST00000624087 4219 ntBASIC10.27□□□□□ -0.76
LINC00242Q5T6M2 CICP8-201ENST00000455800 2813 ntBASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 AL359183.1-201ENST00000623796 2132 ntBASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 AL031595.1-201ENST00000623969 4709 ntBASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 RPL37AP1-201ENST00000412502 279 ntBASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 SPDYE7P-202ENST00000420373 878 ntBASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 HLA-K-203ENST00000430151 1046 ntBASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 CCND1-203ENST00000536559 553 ntTSL 3 BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 KLK8-205ENST00000593490 267 ntTSL 3 BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 AC020910.6-201ENST00000623084 1459 ntBASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LINC00242Q5T6M2 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC10.26□□□□□ -0.77
LINC00242Q5T6M2 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms