Protein–RNA interactions for Protein: Q5SZB4

C9orf50, Uncharacterized protein C9orf50, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50Q5SZB4 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 WASH3P-207ENST00000560956 1394 ntBASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 AC008026.2-201ENST00000495438 348 ntBASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 AC105250.1-201ENST00000509378 2057 ntBASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 BRD7P5-201ENST00000299197 1822 ntBASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
C9orf50Q5SZB4 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 AC098934.1-203ENST00000442868 1262 ntBASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 AL451000.1-201ENST00000451300 1186 ntBASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 RN7SL288P-201ENST00000490496 291 ntBASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 RPS23-207ENST00000511844 530 ntTSL 2 BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 AP000845.1-201ENST00000581677 2131 ntBASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
C9orf50Q5SZB4 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
C9orf50Q5SZB4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
C9orf50Q5SZB4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
C9orf50Q5SZB4 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.62■□□□□ 0.09
C9orf50Q5SZB4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.62■□□□□ 0.09
C9orf50Q5SZB4 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.62■□□□□ 0.09
C9orf50Q5SZB4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.62■□□□□ 0.09
C9orf50Q5SZB4 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
C9orf50Q5SZB4 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
C9orf50Q5SZB4 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC15.62■□□□□ 0.09
C9orf50Q5SZB4 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.62■□□□□ 0.09
C9orf50Q5SZB4 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
C9orf50Q5SZB4 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
C9orf50Q5SZB4 ST13P19-201ENST00000442505 1124 ntBASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms