Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
NKX6-1P78426 ACKR1-201ENST00000368121 1240 ntBASIC13.29□□□□□ -0.28
NKX6-1P78426 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-1P78426 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
NKX6-1P78426 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.29□□□□□ -0.28
NKX6-1P78426 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
NKX6-1P78426 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
NKX6-1P78426 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.29□□□□□ -0.28
NKX6-1P78426 AC104306.2-201ENST00000451877 341 ntBASIC13.29□□□□□ -0.28
NKX6-1P78426 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.29□□□□□ -0.28
NKX6-1P78426 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC13.29□□□□□ -0.28
NKX6-1P78426 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.29□□□□□ -0.28
NKX6-1P78426 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.29□□□□□ -0.28
NKX6-1P78426 FOS-206ENST00000555347 1280 ntTSL 2 BASIC13.29□□□□□ -0.28
NKX6-1P78426 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.29□□□□□ -0.28
NKX6-1P78426 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.29□□□□□ -0.28
NKX6-1P78426 AC244452.3-201ENST00000636814 210 ntBASIC13.29□□□□□ -0.28
NKX6-1P78426 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-1P78426 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-1P78426 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.29□□□□□ -0.28
NKX6-1P78426 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-1P78426 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-1P78426 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-1P78426 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-1P78426 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-1P78426 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
NKX6-1P78426 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-1P78426 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-1P78426 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-1P78426 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-1P78426 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-1P78426 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.29□□□□□ -0.28
NKX6-1P78426 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-1P78426 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
NKX6-1P78426 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.28□□□□□ -0.28
NKX6-1P78426 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
NKX6-1P78426 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-1P78426 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.28□□□□□ -0.28
NKX6-1P78426 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.28□□□□□ -0.28
NKX6-1P78426 MSTO2P-201ENST00000314835 1709 ntBASIC13.28□□□□□ -0.28
NKX6-1P78426 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-1P78426 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.28□□□□□ -0.28
NKX6-1P78426 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.28□□□□□ -0.28
NKX6-1P78426 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-1P78426 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-1P78426 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.28□□□□□ -0.28
NKX6-1P78426 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-1P78426 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.28□□□□□ -0.28
NKX6-1P78426 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-1P78426 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-1P78426 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
NKX6-1P78426 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
NKX6-1P78426 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.28□□□□□ -0.28
NKX6-1P78426 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-1P78426 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
NKX6-1P78426 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-1P78426 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.28□□□□□ -0.28
NKX6-1P78426 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.28□□□□□ -0.28
NKX6-1P78426 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.28□□□□□ -0.28
NKX6-1P78426 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-1P78426 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.28□□□□□ -0.28
NKX6-1P78426 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-1P78426 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.28□□□□□ -0.28
NKX6-1P78426 RNA5SP423-201ENST00000517127 109 ntBASIC13.28□□□□□ -0.28
NKX6-1P78426 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.28□□□□□ -0.28
NKX6-1P78426 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.28□□□□□ -0.28
NKX6-1P78426 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.28□□□□□ -0.28
NKX6-1P78426 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
NKX6-1P78426 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-1P78426 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-1P78426 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-1P78426 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-1P78426 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-1P78426 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-1P78426 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
NKX6-1P78426 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-1P78426 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-1P78426 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.28
NKX6-1P78426 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
NKX6-1P78426 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NKX6-1P78426 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
NKX6-1P78426 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
NKX6-1P78426 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.27□□□□□ -0.28
NKX6-1P78426 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.27□□□□□ -0.28
NKX6-1P78426 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NKX6-1P78426 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.27□□□□□ -0.28
NKX6-1P78426 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NKX6-1P78426 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
NKX6-1P78426 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX6-1P78426 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX6-1P78426 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX6-1P78426 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.27□□□□□ -0.29
NKX6-1P78426 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.27□□□□□ -0.29
NKX6-1P78426 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NKX6-1P78426 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX6-1P78426 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.27□□□□□ -0.29
NKX6-1P78426 Z93015.1-201ENST00000451718 390 ntBASIC13.27□□□□□ -0.29
NKX6-1P78426 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.27□□□□□ -0.29
NKX6-1P78426 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NKX6-1P78426 FAM86HP-204ENST00000513466 959 ntBASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms