Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
IRX4P78413 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
IRX4P78413 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
IRX4P78413 INTS4P1-203ENST00000641008 3683 ntBASIC15.68■□□□□ 0.1
IRX4P78413 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IRX4P78413 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IRX4P78413 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.68■□□□□ 0.1
IRX4P78413 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
IRX4P78413 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.68■□□□□ 0.1
IRX4P78413 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.68■□□□□ 0.1
IRX4P78413 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.68■□□□□ 0.1
IRX4P78413 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
IRX4P78413 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.68■□□□□ 0.1
IRX4P78413 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.68■□□□□ 0.1
IRX4P78413 AC004987.2-201ENST00000395959 1148 ntBASIC15.68■□□□□ 0.1
IRX4P78413 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.68■□□□□ 0.1
IRX4P78413 AC134915.1-201ENST00000426461 574 ntBASIC15.68■□□□□ 0.1
IRX4P78413 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
IRX4P78413 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.68■□□□□ 0.1
IRX4P78413 RPL13AP20-201ENST00000459725 609 ntBASIC15.68■□□□□ 0.1
IRX4P78413 FTH1P14-201ENST00000482930 551 ntBASIC15.68■□□□□ 0.1
IRX4P78413 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IRX4P78413 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.68■□□□□ 0.1
IRX4P78413 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.68■□□□□ 0.1
IRX4P78413 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.68■□□□□ 0.1
IRX4P78413 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
IRX4P78413 AL450472.2-201ENST00000603663 1156 ntBASIC15.68■□□□□ 0.1
IRX4P78413 RETN-203ENST00000629642 400 ntTSL 5 BASIC15.68■□□□□ 0.1
IRX4P78413 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
IRX4P78413 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.68■□□□□ 0.1
IRX4P78413 AL359258.3-201ENST00000622910 2331 ntBASIC15.68■□□□□ 0.1
IRX4P78413 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IRX4P78413 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IRX4P78413 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IRX4P78413 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.68■□□□□ 0.1
IRX4P78413 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
IRX4P78413 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IRX4P78413 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IRX4P78413 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IRX4P78413 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
IRX4P78413 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IRX4P78413 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
IRX4P78413 AC013726.1-201ENST00000563747 2285 ntBASIC15.68■□□□□ 0.1
IRX4P78413 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.68■□□□□ 0.1
IRX4P78413 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
IRX4P78413 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
IRX4P78413 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
IRX4P78413 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
IRX4P78413 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.67■□□□□ 0.1
IRX4P78413 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.67■□□□□ 0.1
IRX4P78413 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
IRX4P78413 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.67■□□□□ 0.1
IRX4P78413 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
IRX4P78413 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.67■□□□□ 0.1
IRX4P78413 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
IRX4P78413 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
IRX4P78413 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.67■□□□□ 0.1
IRX4P78413 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
IRX4P78413 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
IRX4P78413 AC092506.1-202ENST00000401022 528 ntBASIC15.67■□□□□ 0.1
IRX4P78413 AZGP1P1-201ENST00000411909 902 ntBASIC15.67■□□□□ 0.1
IRX4P78413 SOCS2P1-201ENST00000417727 557 ntBASIC15.67■□□□□ 0.1
IRX4P78413 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC15.67■□□□□ 0.1
IRX4P78413 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.67■□□□□ 0.1
IRX4P78413 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.67■□□□□ 0.1
IRX4P78413 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.67■□□□□ 0.1
IRX4P78413 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.67■□□□□ 0.1
IRX4P78413 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.67■□□□□ 0.1
IRX4P78413 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.67■□□□□ 0.1
IRX4P78413 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.67■□□□□ 0.1
IRX4P78413 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.67■□□□□ 0.1
IRX4P78413 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
IRX4P78413 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.67■□□□□ 0.1
IRX4P78413 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.67■□□□□ 0.1
IRX4P78413 AC009542.2-202ENST00000619004 1067 ntBASIC15.67■□□□□ 0.1
IRX4P78413 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.67■□□□□ 0.1
IRX4P78413 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.67■□□□□ 0.1
IRX4P78413 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.67■□□□□ 0.1
IRX4P78413 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
IRX4P78413 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
IRX4P78413 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
IRX4P78413 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
IRX4P78413 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
IRX4P78413 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
IRX4P78413 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
IRX4P78413 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.67■□□□□ 0.1
IRX4P78413 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
IRX4P78413 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
IRX4P78413 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
IRX4P78413 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
IRX4P78413 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
IRX4P78413 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.67■□□□□ 0.1
IRX4P78413 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
IRX4P78413 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
IRX4P78413 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IRX4P78413 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
IRX4P78413 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.66■□□□□ 0.1
IRX4P78413 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.66■□□□□ 0.1
IRX4P78413 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IRX4P78413 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms