Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
HIST1H3AP68431 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.09□□□□□ -0.31
HIST1H3AP68431 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.31
HIST1H3AP68431 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.08□□□□□ -0.31
HIST1H3AP68431 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
HIST1H3AP68431 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
HIST1H3AP68431 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.31
HIST1H3AP68431 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
HIST1H3AP68431 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HIST1H3AP68431 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
HIST1H3AP68431 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.08□□□□□ -0.32
HIST1H3AP68431 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HIST1H3AP68431 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HIST1H3AP68431 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HIST1H3AP68431 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HIST1H3AP68431 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
HIST1H3AP68431 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HIST1H3AP68431 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.08□□□□□ -0.32
HIST1H3AP68431 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HIST1H3AP68431 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.08□□□□□ -0.32
HIST1H3AP68431 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.08□□□□□ -0.32
HIST1H3AP68431 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.08□□□□□ -0.32
HIST1H3AP68431 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.08□□□□□ -0.32
HIST1H3AP68431 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.08□□□□□ -0.32
HIST1H3AP68431 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.08□□□□□ -0.32
HIST1H3AP68431 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
HIST1H3AP68431 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.08□□□□□ -0.32
HIST1H3AP68431 TDH-203ENST00000531764 1110 ntBASIC13.08□□□□□ -0.32
HIST1H3AP68431 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.08□□□□□ -0.32
HIST1H3AP68431 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.08□□□□□ -0.32
HIST1H3AP68431 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
HIST1H3AP68431 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HIST1H3AP68431 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.08□□□□□ -0.32
HIST1H3AP68431 AC138696.2-201ENST00000607376 223 ntBASIC13.08□□□□□ -0.32
HIST1H3AP68431 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HIST1H3AP68431 AC025048.6-201ENST00000634326 1161 ntBASIC13.08□□□□□ -0.32
HIST1H3AP68431 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
HIST1H3AP68431 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.08□□□□□ -0.32
HIST1H3AP68431 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HIST1H3AP68431 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.08□□□□□ -0.32
HIST1H3AP68431 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HIST1H3AP68431 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HIST1H3AP68431 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
HIST1H3AP68431 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.08□□□□□ -0.32
HIST1H3AP68431 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
HIST1H3AP68431 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
HIST1H3AP68431 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
HIST1H3AP68431 CLUHP2-201ENST00000426660 1303 ntBASIC13.08□□□□□ -0.32
HIST1H3AP68431 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HIST1H3AP68431 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.32
HIST1H3AP68431 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HIST1H3AP68431 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.08□□□□□ -0.32
HIST1H3AP68431 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
HIST1H3AP68431 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.08□□□□□ -0.32
HIST1H3AP68431 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.07□□□□□ -0.32
HIST1H3AP68431 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
HIST1H3AP68431 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.07□□□□□ -0.32
HIST1H3AP68431 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HIST1H3AP68431 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HIST1H3AP68431 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.07□□□□□ -0.32
HIST1H3AP68431 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HIST1H3AP68431 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.07□□□□□ -0.32
HIST1H3AP68431 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.07□□□□□ -0.32
HIST1H3AP68431 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HIST1H3AP68431 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HIST1H3AP68431 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HIST1H3AP68431 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HIST1H3AP68431 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HIST1H3AP68431 AC097359.2-201ENST00000604992 2389 ntBASIC13.07□□□□□ -0.32
HIST1H3AP68431 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HIST1H3AP68431 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HIST1H3AP68431 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HIST1H3AP68431 PCDHA3-202ENST00000532566 4594 ntBASIC13.07□□□□□ -0.32
HIST1H3AP68431 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HIST1H3AP68431 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HIST1H3AP68431 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.07□□□□□ -0.32
HIST1H3AP68431 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.07□□□□□ -0.32
HIST1H3AP68431 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HIST1H3AP68431 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.07□□□□□ -0.32
HIST1H3AP68431 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
HIST1H3AP68431 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.07□□□□□ -0.32
HIST1H3AP68431 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.07□□□□□ -0.32
HIST1H3AP68431 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.07□□□□□ -0.32
HIST1H3AP68431 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.07□□□□□ -0.32
HIST1H3AP68431 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HIST1H3AP68431 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.07□□□□□ -0.32
HIST1H3AP68431 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HIST1H3AP68431 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.07□□□□□ -0.32
HIST1H3AP68431 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
HIST1H3AP68431 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.07□□□□□ -0.32
HIST1H3AP68431 ENPP7P14-201ENST00000621765 1040 ntBASIC13.07□□□□□ -0.32
HIST1H3AP68431 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.07□□□□□ -0.32
HIST1H3AP68431 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.07□□□□□ -0.32
HIST1H3AP68431 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.07□□□□□ -0.32
HIST1H3AP68431 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HIST1H3AP68431 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.07□□□□□ -0.32
HIST1H3AP68431 AC007686.3-201ENST00000619017 3487 ntBASIC13.07□□□□□ -0.32
HIST1H3AP68431 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
HIST1H3AP68431 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HIST1H3AP68431 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms