Protein–RNA interactions for Protein: P55196

AFDN, Afadin, humanhuman

Known RBP Predictions only

Length 1,824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFDNP55196 AC018463.1-201ENST00000456674 917 ntBASIC18.46■□□□□ 0.55
AFDNP55196 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC18.46■□□□□ 0.55
AFDNP55196 NEU3-207ENST00000534628 746 ntTSL 2 BASIC18.46■□□□□ 0.55
AFDNP55196 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC18.46■□□□□ 0.55
AFDNP55196 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
AFDNP55196 MX1-218ENST00000619682 1980 ntTSL 5 BASIC18.46■□□□□ 0.55
AFDNP55196 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AFDNP55196 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AFDNP55196 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
AFDNP55196 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
AFDNP55196 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
AFDNP55196 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
AFDNP55196 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
AFDNP55196 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC18.46■□□□□ 0.55
AFDNP55196 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
AFDNP55196 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
AFDNP55196 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC18.46■□□□□ 0.55
AFDNP55196 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AFDNP55196 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC18.46■□□□□ 0.55
AFDNP55196 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
AFDNP55196 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
AFDNP55196 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
AFDNP55196 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AFDNP55196 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
AFDNP55196 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AFDNP55196 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
AFDNP55196 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC18.46■□□□□ 0.55
AFDNP55196 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
AFDNP55196 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
AFDNP55196 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC18.46■□□□□ 0.55
AFDNP55196 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC18.46■□□□□ 0.55
AFDNP55196 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
AFDNP55196 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC18.46■□□□□ 0.55
AFDNP55196 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
AFDNP55196 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
AFDNP55196 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC18.46■□□□□ 0.55
AFDNP55196 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AFDNP55196 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AFDNP55196 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.46■□□□□ 0.55
AFDNP55196 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AFDNP55196 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
AFDNP55196 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
AFDNP55196 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
AFDNP55196 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC18.45■□□□□ 0.54
AFDNP55196 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.45■□□□□ 0.54
AFDNP55196 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
AFDNP55196 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
AFDNP55196 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
AFDNP55196 RPSAP15-201ENST00000448168 861 ntBASIC18.45■□□□□ 0.54
AFDNP55196 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC18.45■□□□□ 0.54
AFDNP55196 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
AFDNP55196 AC103810.10-201ENST00000606504 343 ntBASIC18.45■□□□□ 0.54
AFDNP55196 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC18.45■□□□□ 0.54
AFDNP55196 AC105137.3-201ENST00000617588 984 ntBASIC18.45■□□□□ 0.54
AFDNP55196 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
AFDNP55196 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
AFDNP55196 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
AFDNP55196 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
AFDNP55196 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
AFDNP55196 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
AFDNP55196 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
AFDNP55196 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
AFDNP55196 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC18.45■□□□□ 0.54
AFDNP55196 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
AFDNP55196 AC139712.1-201ENST00000378256 1875 ntBASIC18.45■□□□□ 0.54
AFDNP55196 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC18.45■□□□□ 0.54
AFDNP55196 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
AFDNP55196 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
AFDNP55196 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.44■□□□□ 0.54
AFDNP55196 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
AFDNP55196 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
AFDNP55196 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
AFDNP55196 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
AFDNP55196 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
AFDNP55196 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
AFDNP55196 HIST2H2BA-201ENST00000412169 381 ntBASIC18.44■□□□□ 0.54
AFDNP55196 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC18.44■□□□□ 0.54
AFDNP55196 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC18.44■□□□□ 0.54
AFDNP55196 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
AFDNP55196 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
AFDNP55196 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
AFDNP55196 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC18.44■□□□□ 0.54
AFDNP55196 AC009145.4-201ENST00000625119 1294 ntBASIC18.44■□□□□ 0.54
AFDNP55196 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
AFDNP55196 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
AFDNP55196 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.44■□□□□ 0.54
AFDNP55196 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
AFDNP55196 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
AFDNP55196 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC18.44■□□□□ 0.54
AFDNP55196 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.44■□□□□ 0.54
AFDNP55196 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
AFDNP55196 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
AFDNP55196 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
AFDNP55196 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
AFDNP55196 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
AFDNP55196 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
AFDNP55196 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
AFDNP55196 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
AFDNP55196 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
AFDNP55196 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms