Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
APOC4P55056 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
APOC4P55056 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC10.96□□□□□ -0.65
APOC4P55056 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC10.96□□□□□ -0.65
APOC4P55056 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
APOC4P55056 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
APOC4P55056 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
APOC4P55056 LCK-206ENST00000373564 2137 ntTSL 5 BASIC10.96□□□□□ -0.65
APOC4P55056 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
APOC4P55056 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
APOC4P55056 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
APOC4P55056 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
APOC4P55056 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
APOC4P55056 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
APOC4P55056 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
APOC4P55056 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
APOC4P55056 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
APOC4P55056 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
APOC4P55056 RN7SKP175-201ENST00000408472 289 ntBASIC10.96□□□□□ -0.65
APOC4P55056 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
APOC4P55056 NME6-203ENST00000415644 849 ntTSL 2 BASIC10.96□□□□□ -0.65
APOC4P55056 HSPB1P2-201ENST00000448722 546 ntBASIC10.96□□□□□ -0.65
APOC4P55056 AC004898.1-201ENST00000451057 766 ntBASIC10.96□□□□□ -0.65
APOC4P55056 AL591846.1-201ENST00000451736 433 ntBASIC10.96□□□□□ -0.65
APOC4P55056 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
APOC4P55056 KRT8P13-201ENST00000463294 1010 ntBASIC10.96□□□□□ -0.65
APOC4P55056 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC10.96□□□□□ -0.65
APOC4P55056 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
APOC4P55056 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC10.96□□□□□ -0.65
APOC4P55056 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC10.96□□□□□ -0.65
APOC4P55056 EMC4-209ENST00000559421 497 ntTSL 2 BASIC10.96□□□□□ -0.65
APOC4P55056 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC10.96□□□□□ -0.65
APOC4P55056 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC10.96□□□□□ -0.65
APOC4P55056 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC10.96□□□□□ -0.65
APOC4P55056 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
APOC4P55056 KLK11-210ENST00000600362 759 ntTSL 3 BASIC10.96□□□□□ -0.65
APOC4P55056 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC10.96□□□□□ -0.65
APOC4P55056 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC10.96□□□□□ -0.65
APOC4P55056 AC005695.3-201ENST00000614522 232 ntBASIC10.96□□□□□ -0.65
APOC4P55056 AL023803.2-201ENST00000620080 638 ntBASIC10.96□□□□□ -0.65
APOC4P55056 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
APOC4P55056 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC10.96□□□□□ -0.65
APOC4P55056 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC10.96□□□□□ -0.65
APOC4P55056 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
APOC4P55056 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
APOC4P55056 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
APOC4P55056 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC10.96□□□□□ -0.66
APOC4P55056 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
APOC4P55056 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
APOC4P55056 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
APOC4P55056 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
APOC4P55056 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC10.96□□□□□ -0.66
APOC4P55056 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
APOC4P55056 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
APOC4P55056 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.66
APOC4P55056 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC10.96□□□□□ -0.66
APOC4P55056 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
APOC4P55056 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.66
APOC4P55056 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
APOC4P55056 SLC9A7P1-202ENST00000556476 2239 ntBASIC10.96□□□□□ -0.66
APOC4P55056 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC10.96□□□□□ -0.66
APOC4P55056 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
APOC4P55056 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
APOC4P55056 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
APOC4P55056 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 SALL4P5-201ENST00000419001 1760 ntBASIC10.95□□□□□ -0.66
APOC4P55056 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC10.95□□□□□ -0.66
APOC4P55056 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
APOC4P55056 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
APOC4P55056 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC10.95□□□□□ -0.66
APOC4P55056 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC10.95□□□□□ -0.66
APOC4P55056 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC10.95□□□□□ -0.66
APOC4P55056 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 GSN-206ENST00000394353 2311 ntTSL 2 BASIC10.95□□□□□ -0.66
APOC4P55056 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC10.95□□□□□ -0.66
APOC4P55056 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
APOC4P55056 MIR663B-201ENST00000408361 115 ntBASIC10.95□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms