Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.31□□□□□ -0.12
NR1H2P55055 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.31□□□□□ -0.12
NR1H2P55055 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H2P55055 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H2P55055 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
NR1H2P55055 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.31□□□□□ -0.12
NR1H2P55055 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
NR1H2P55055 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H2P55055 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H2P55055 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.31□□□□□ -0.12
NR1H2P55055 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H2P55055 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H2P55055 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H2P55055 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.31□□□□□ -0.12
NR1H2P55055 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NR1H2P55055 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
NR1H2P55055 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NR1H2P55055 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NR1H2P55055 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
NR1H2P55055 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.3□□□□□ -0.12
NR1H2P55055 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NR1H2P55055 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
NR1H2P55055 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NR1H2P55055 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NR1H2P55055 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NR1H2P55055 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
NR1H2P55055 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.3□□□□□ -0.12
NR1H2P55055 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NR1H2P55055 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.3□□□□□ -0.12
NR1H2P55055 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC14.3□□□□□ -0.12
NR1H2P55055 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.3□□□□□ -0.12
NR1H2P55055 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.3□□□□□ -0.12
NR1H2P55055 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NR1H2P55055 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
NR1H2P55055 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.3□□□□□ -0.12
NR1H2P55055 AC241585.1-201ENST00000433527 519 ntBASIC14.3□□□□□ -0.12
NR1H2P55055 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.3□□□□□ -0.12
NR1H2P55055 TSPY16P-201ENST00000449843 468 ntBASIC14.3□□□□□ -0.12
NR1H2P55055 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.3□□□□□ -0.12
NR1H2P55055 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NR1H2P55055 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.3□□□□□ -0.12
NR1H2P55055 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.3□□□□□ -0.12
NR1H2P55055 AL138918.1-201ENST00000568306 659 ntBASIC14.3□□□□□ -0.12
NR1H2P55055 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.3□□□□□ -0.12
NR1H2P55055 MIR4321-201ENST00000592276 80 ntBASIC14.3□□□□□ -0.12
NR1H2P55055 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.3□□□□□ -0.12
NR1H2P55055 AC007967.4-201ENST00000614700 386 ntBASIC14.3□□□□□ -0.12
NR1H2P55055 AC073592.8-201ENST00000624126 511 ntBASIC14.3□□□□□ -0.12
NR1H2P55055 AL035252.4-201ENST00000624174 288 ntBASIC14.3□□□□□ -0.12
NR1H2P55055 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.3□□□□□ -0.12
NR1H2P55055 AF228730.6-201ENST00000641497 218 ntBASIC14.3□□□□□ -0.12
NR1H2P55055 AC084121.3-201ENST00000641716 218 ntBASIC14.3□□□□□ -0.12
NR1H2P55055 AC105233.6-201ENST00000642093 218 ntBASIC14.3□□□□□ -0.12
NR1H2P55055 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NR1H2P55055 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NR1H2P55055 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.3□□□□□ -0.12
NR1H2P55055 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.3□□□□□ -0.12
NR1H2P55055 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NR1H2P55055 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NR1H2P55055 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NR1H2P55055 AL035456.1-201ENST00000456064 1369 ntBASIC14.3□□□□□ -0.12
NR1H2P55055 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
NR1H2P55055 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
NR1H2P55055 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
NR1H2P55055 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.3□□□□□ -0.12
NR1H2P55055 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NR1H2P55055 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NR1H2P55055 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NR1H2P55055 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NR1H2P55055 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
NR1H2P55055 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NR1H2P55055 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NR1H2P55055 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NR1H2P55055 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NR1H2P55055 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.3□□□□□ -0.12
NR1H2P55055 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NR1H2P55055 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.3□□□□□ -0.12
NR1H2P55055 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR1H2P55055 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR1H2P55055 AC055811.4-201ENST00000624039 1754 ntBASIC14.29□□□□□ -0.12
NR1H2P55055 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR1H2P55055 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NR1H2P55055 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR1H2P55055 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR1H2P55055 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
NR1H2P55055 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.29□□□□□ -0.12
NR1H2P55055 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.29□□□□□ -0.12
NR1H2P55055 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
NR1H2P55055 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR1H2P55055 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR1H2P55055 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR1H2P55055 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.29□□□□□ -0.12
NR1H2P55055 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR1H2P55055 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR1H2P55055 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR1H2P55055 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR1H2P55055 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NR1H2P55055 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.29□□□□□ -0.12
NR1H2P55055 AC004945.1-201ENST00000416738 983 ntBASIC14.29□□□□□ -0.12
NR1H2P55055 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms