Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CDK7P50613 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.45■□□□□ 0.22
CDK7P50613 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDK7P50613 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDK7P50613 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
CDK7P50613 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
CDK7P50613 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CDK7P50613 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
CDK7P50613 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CDK7P50613 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDK7P50613 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC16.45■□□□□ 0.22
CDK7P50613 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.45■□□□□ 0.22
CDK7P50613 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.45■□□□□ 0.22
CDK7P50613 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.45■□□□□ 0.22
CDK7P50613 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC16.45■□□□□ 0.22
CDK7P50613 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CDK7P50613 AL031713.1-201ENST00000564813 661 ntBASIC16.45■□□□□ 0.22
CDK7P50613 MIR3677-201ENST00000578964 60 ntBASIC16.45■□□□□ 0.22
CDK7P50613 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC16.45■□□□□ 0.22
CDK7P50613 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC16.45■□□□□ 0.22
CDK7P50613 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC16.45■□□□□ 0.22
CDK7P50613 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC16.45■□□□□ 0.22
CDK7P50613 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.45■□□□□ 0.22
CDK7P50613 HPN-206ENST00000597419 1212 ntTSL 5 BASIC16.45■□□□□ 0.22
CDK7P50613 AL109837.1-201ENST00000603272 613 ntBASIC16.45■□□□□ 0.22
CDK7P50613 AL157813.1-201ENST00000612996 587 ntBASIC16.45■□□□□ 0.22
CDK7P50613 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CDK7P50613 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDK7P50613 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CDK7P50613 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.45■□□□□ 0.22
CDK7P50613 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.45■□□□□ 0.22
CDK7P50613 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDK7P50613 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDK7P50613 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
CDK7P50613 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CDK7P50613 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDK7P50613 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDK7P50613 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDK7P50613 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDK7P50613 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CDK7P50613 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDK7P50613 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CDK7P50613 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDK7P50613 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.45■□□□□ 0.22
CDK7P50613 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CDK7P50613 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDK7P50613 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDK7P50613 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.44■□□□□ 0.22
CDK7P50613 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDK7P50613 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDK7P50613 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDK7P50613 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.44■□□□□ 0.22
CDK7P50613 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDK7P50613 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDK7P50613 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDK7P50613 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CDK7P50613 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDK7P50613 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDK7P50613 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.44■□□□□ 0.22
CDK7P50613 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.44■□□□□ 0.22
CDK7P50613 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDK7P50613 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDK7P50613 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDK7P50613 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDK7P50613 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.44■□□□□ 0.22
CDK7P50613 CAP2P1-201ENST00000557743 1390 ntBASIC16.44■□□□□ 0.22
CDK7P50613 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
CDK7P50613 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDK7P50613 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDK7P50613 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDK7P50613 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDK7P50613 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDK7P50613 AL157407.1-201ENST00000435784 904 ntBASIC16.44■□□□□ 0.22
CDK7P50613 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC16.44■□□□□ 0.22
CDK7P50613 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC16.44■□□□□ 0.22
CDK7P50613 AC008723.1-201ENST00000506922 207 ntBASIC16.44■□□□□ 0.22
CDK7P50613 CTBP2P4-201ENST00000513884 920 ntBASIC16.44■□□□□ 0.22
CDK7P50613 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC16.44■□□□□ 0.22
CDK7P50613 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC16.44■□□□□ 0.22
CDK7P50613 MIR4649-201ENST00000582839 64 ntBASIC16.44■□□□□ 0.22
CDK7P50613 MIR6769A-201ENST00000617340 73 ntBASIC16.44■□□□□ 0.22
CDK7P50613 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.44■□□□□ 0.22
CDK7P50613 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.44■□□□□ 0.22
CDK7P50613 AC010491.1-201ENST00000563101 2797 ntBASIC16.44■□□□□ 0.22
CDK7P50613 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDK7P50613 REXO1L4P-201ENST00000605109 1937 ntBASIC16.44■□□□□ 0.22
CDK7P50613 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDK7P50613 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDK7P50613 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDK7P50613 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
CDK7P50613 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDK7P50613 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDK7P50613 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.44■□□□□ 0.22
CDK7P50613 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDK7P50613 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDK7P50613 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDK7P50613 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDK7P50613 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDK7P50613 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDK7P50613 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms