Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AC063926.3-201ENST00000624734 5658 ntBASIC16.29■□□□□ 0.2
CASP4P49662 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CASP4P49662 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CASP4P49662 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.29■□□□□ 0.2
CASP4P49662 AC079776.1-201ENST00000401540 1152 ntBASIC16.29■□□□□ 0.2
CASP4P49662 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
CASP4P49662 AC112492.5-201ENST00000421897 457 ntBASIC16.29■□□□□ 0.2
CASP4P49662 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.29■□□□□ 0.2
CASP4P49662 AC007551.1-201ENST00000457394 519 ntBASIC16.29■□□□□ 0.2
CASP4P49662 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.29■□□□□ 0.2
CASP4P49662 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.29■□□□□ 0.2
CASP4P49662 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.29■□□□□ 0.2
CASP4P49662 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.29■□□□□ 0.2
CASP4P49662 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CASP4P49662 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CASP4P49662 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CASP4P49662 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.29■□□□□ 0.2
CASP4P49662 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CASP4P49662 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
CASP4P49662 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CASP4P49662 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CASP4P49662 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CASP4P49662 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CASP4P49662 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CASP4P49662 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CASP4P49662 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CASP4P49662 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CASP4P49662 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CASP4P49662 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.29■□□□□ 0.2
CASP4P49662 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CASP4P49662 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CASP4P49662 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.29■□□□□ 0.2
CASP4P49662 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CASP4P49662 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CASP4P49662 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.29■□□□□ 0.2
CASP4P49662 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CASP4P49662 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CASP4P49662 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CASP4P49662 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CASP4P49662 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.28■□□□□ 0.2
CASP4P49662 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.28■□□□□ 0.2
CASP4P49662 PCDHA3-202ENST00000532566 4594 ntBASIC16.28■□□□□ 0.2
CASP4P49662 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CASP4P49662 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CASP4P49662 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CASP4P49662 TPM3P8-201ENST00000330554 643 ntBASIC16.28■□□□□ 0.2
CASP4P49662 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CASP4P49662 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CASP4P49662 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CASP4P49662 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CASP4P49662 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.28■□□□□ 0.2
CASP4P49662 AC016694.1-201ENST00000434179 700 ntBASIC16.28■□□□□ 0.2
CASP4P49662 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.28■□□□□ 0.2
CASP4P49662 KRT17P8-201ENST00000540749 863 ntBASIC16.28■□□□□ 0.2
CASP4P49662 AC078819.1-201ENST00000547454 765 ntBASIC16.28■□□□□ 0.2
CASP4P49662 AC012085.1-201ENST00000548270 765 ntBASIC16.28■□□□□ 0.2
CASP4P49662 KRT90P-201ENST00000549264 1064 ntBASIC16.28■□□□□ 0.2
CASP4P49662 AC106820.3-201ENST00000561653 397 ntBASIC16.28■□□□□ 0.2
CASP4P49662 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.28■□□□□ 0.2
CASP4P49662 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.28■□□□□ 0.2
CASP4P49662 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CASP4P49662 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CASP4P49662 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CASP4P49662 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CASP4P49662 AGGF1P1-201ENST00000509500 2073 ntBASIC16.28■□□□□ 0.2
CASP4P49662 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CASP4P49662 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CASP4P49662 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CASP4P49662 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CASP4P49662 AL136172.1-201ENST00000598590 1394 ntBASIC16.27■□□□□ 0.2
CASP4P49662 LINC01230-201ENST00000625222 3017 ntBASIC16.27■□□□□ 0.2
CASP4P49662 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CASP4P49662 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CASP4P49662 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CASP4P49662 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CASP4P49662 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CASP4P49662 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CASP4P49662 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CASP4P49662 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
CASP4P49662 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CASP4P49662 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CASP4P49662 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CASP4P49662 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CASP4P49662 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CASP4P49662 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.27■□□□□ 0.2
CASP4P49662 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.27■□□□□ 0.2
CASP4P49662 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CASP4P49662 C2orf27AP3-201ENST00000434123 579 ntBASIC16.27■□□□□ 0.2
CASP4P49662 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CASP4P49662 FTLP10-202ENST00000505798 471 ntBASIC16.27■□□□□ 0.2
CASP4P49662 AC022447.6-201ENST00000515522 438 ntBASIC16.27■□□□□ 0.2
CASP4P49662 RNA5SP486-201ENST00000515961 83 ntBASIC16.27■□□□□ 0.2
CASP4P49662 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.27■□□□□ 0.2
CASP4P49662 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.27■□□□□ 0.2
CASP4P49662 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.27■□□□□ 0.2
CASP4P49662 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.27■□□□□ 0.2
CASP4P49662 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.27■□□□□ 0.2
CASP4P49662 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.27■□□□□ 0.2
CASP4P49662 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CASP4P49662 AL354718.3-201ENST00000616414 581 ntBASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms