Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
CKS2P33552 AC092910.1-201ENST00000482027 1129 ntBASIC11.07□□□□□ -0.64
CKS2P33552 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC11.07□□□□□ -0.64
CKS2P33552 PENK-208ENST00000523051 772 ntTSL 5 BASIC11.07□□□□□ -0.64
CKS2P33552 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC11.07□□□□□ -0.64
CKS2P33552 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC11.07□□□□□ -0.64
CKS2P33552 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC11.07□□□□□ -0.64
CKS2P33552 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC11.07□□□□□ -0.64
CKS2P33552 NAA38-207ENST00000576861 556 ntTSL 3 BASIC11.07□□□□□ -0.64
CKS2P33552 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CKS2P33552 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
CKS2P33552 AL645728.2-202ENST00000641679 227 ntBASIC11.07□□□□□ -0.64
CKS2P33552 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CKS2P33552 AC015818.8-201ENST00000587907 1519 ntBASIC11.07□□□□□ -0.64
CKS2P33552 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
CKS2P33552 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CKS2P33552 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CKS2P33552 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
CKS2P33552 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CKS2P33552 MFF-204ENST00000353339 2186 ntTSL 5 BASIC11.07□□□□□ -0.64
CKS2P33552 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC11.07□□□□□ -0.64
CKS2P33552 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CKS2P33552 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC11.07□□□□□ -0.64
CKS2P33552 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC11.07□□□□□ -0.64
CKS2P33552 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC11.07□□□□□ -0.64
CKS2P33552 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CKS2P33552 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CKS2P33552 AL354702.1-201ENST00000442006 1960 ntBASIC11.07□□□□□ -0.64
CKS2P33552 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CKS2P33552 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC11.06□□□□□ -0.64
CKS2P33552 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
CKS2P33552 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
CKS2P33552 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
CKS2P33552 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
CKS2P33552 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
CKS2P33552 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CKS2P33552 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC11.06□□□□□ -0.64
CKS2P33552 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
CKS2P33552 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
CKS2P33552 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CKS2P33552 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC11.06□□□□□ -0.64
CKS2P33552 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CKS2P33552 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CKS2P33552 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
CKS2P33552 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC11.06□□□□□ -0.64
CKS2P33552 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
CKS2P33552 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
CKS2P33552 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
CKS2P33552 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
CKS2P33552 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CKS2P33552 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CKS2P33552 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC11.06□□□□□ -0.64
CKS2P33552 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
CKS2P33552 HLA-H-201ENST00000383620 1096 ntBASIC11.06□□□□□ -0.64
CKS2P33552 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
CKS2P33552 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC11.06□□□□□ -0.64
CKS2P33552 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC11.06□□□□□ -0.64
CKS2P33552 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC11.06□□□□□ -0.64
CKS2P33552 AF186996.4-201ENST00000467186 377 ntBASIC11.06□□□□□ -0.64
CKS2P33552 TMEM198B-204ENST00000484016 896 ntBASIC11.06□□□□□ -0.64
CKS2P33552 PRELID1P1-202ENST00000567272 903 ntBASIC11.06□□□□□ -0.64
CKS2P33552 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
CKS2P33552 AC027307.2-201ENST00000591252 911 ntBASIC11.06□□□□□ -0.64
CKS2P33552 NKG7-205ENST00000600427 520 ntTSL 3 BASIC11.06□□□□□ -0.64
CKS2P33552 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC11.06□□□□□ -0.64
CKS2P33552 AQP6-205ENST00000618286 829 ntTSL 5 BASIC11.06□□□□□ -0.64
CKS2P33552 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC11.06□□□□□ -0.64
CKS2P33552 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
CKS2P33552 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CKS2P33552 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC11.06□□□□□ -0.64
CKS2P33552 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC11.06□□□□□ -0.64
CKS2P33552 AC025580.3-201ENST00000617932 1424 ntBASIC11.06□□□□□ -0.64
CKS2P33552 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC11.06□□□□□ -0.64
CKS2P33552 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CKS2P33552 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
CKS2P33552 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CKS2P33552 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
CKS2P33552 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
CKS2P33552 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
CKS2P33552 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CKS2P33552 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC11.06□□□□□ -0.64
CKS2P33552 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CKS2P33552 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CKS2P33552 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC11.06□□□□□ -0.64
CKS2P33552 AL591122.2-201ENST00000624125 1853 ntBASIC11.06□□□□□ -0.64
CKS2P33552 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC11.06□□□□□ -0.64
CKS2P33552 BCAR1-209ENST00000546196 1340 ntBASIC11.06□□□□□ -0.64
CKS2P33552 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CKS2P33552 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
CKS2P33552 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
CKS2P33552 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CKS2P33552 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CKS2P33552 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
CKS2P33552 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
CKS2P33552 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
CKS2P33552 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CKS2P33552 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC11.05□□□□□ -0.64
CKS2P33552 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CKS2P33552 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CKS2P33552 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms