Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
LSP1P33241 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LSP1P33241 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.07■□□□□ 0
LSP1P33241 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LSP1P33241 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
LSP1P33241 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC15.07■□□□□ 0
LSP1P33241 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
LSP1P33241 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
LSP1P33241 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
LSP1P33241 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
LSP1P33241 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC15.06■□□□□ 0
LSP1P33241 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LSP1P33241 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC15.06■□□□□ 0
LSP1P33241 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LSP1P33241 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
LSP1P33241 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
LSP1P33241 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
LSP1P33241 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
LSP1P33241 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
LSP1P33241 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.06■□□□□ 0
LSP1P33241 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
LSP1P33241 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC15.06■□□□□ 0
LSP1P33241 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LSP1P33241 NCLP1-201ENST00000445357 1963 ntBASIC15.06■□□□□ 0
LSP1P33241 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC15.06■□□□□ 0
LSP1P33241 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LSP1P33241 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
LSP1P33241 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LSP1P33241 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LSP1P33241 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.06■□□□□ 0
LSP1P33241 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.06■□□□□ 0
LSP1P33241 TARDBPP1-201ENST00000442013 1203 ntBASIC15.06■□□□□ 0
LSP1P33241 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.06■□□□□ 0
LSP1P33241 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.06■□□□□ 0
LSP1P33241 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
LSP1P33241 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.06■□□□□ 0
LSP1P33241 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.06■□□□□ 0
LSP1P33241 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LSP1P33241 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
LSP1P33241 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.06■□□□□ 0
LSP1P33241 AC074044.1-201ENST00000609673 707 ntBASIC15.06■□□□□ 0
LSP1P33241 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LSP1P33241 AC007064.4-201ENST00000637740 555 ntBASIC15.06■□□□□ 0
LSP1P33241 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.06■□□□□ 0
LSP1P33241 AL360270.3-201ENST00000609118 1348 ntBASIC15.06■□□□□ 0
LSP1P33241 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.06■□□□□ 0
LSP1P33241 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC15.06■□□□□ 0
LSP1P33241 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LSP1P33241 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
LSP1P33241 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LSP1P33241 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LSP1P33241 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC15.06■□□□□ 0
LSP1P33241 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
LSP1P33241 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
LSP1P33241 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
LSP1P33241 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LSP1P33241 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.06■□□□□ 0
LSP1P33241 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
LSP1P33241 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC15.06■□□□□ 0
LSP1P33241 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
LSP1P33241 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LSP1P33241 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.05■□□□□ 0
LSP1P33241 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC15.05■□□□□ 0
LSP1P33241 AL157996.1-201ENST00000624684 2299 ntBASIC15.05■□□□□ 0
LSP1P33241 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC15.05■□□□□ 0
LSP1P33241 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
LSP1P33241 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC15.05■□□□□ 0
LSP1P33241 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
LSP1P33241 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
LSP1P33241 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC15.05■□□□□ -0
LSP1P33241 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC15.05■□□□□ -0
LSP1P33241 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
LSP1P33241 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LSP1P33241 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.05■□□□□ -0
LSP1P33241 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.05■□□□□ -0
LSP1P33241 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.05■□□□□ -0
LSP1P33241 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.05■□□□□ -0
LSP1P33241 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.05■□□□□ -0
LSP1P33241 AC079781.3-201ENST00000449110 356 ntBASIC15.05■□□□□ -0
LSP1P33241 RNPS1P1-201ENST00000507437 918 ntBASIC15.05■□□□□ -0
LSP1P33241 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.05■□□□□ -0
LSP1P33241 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.05■□□□□ -0
LSP1P33241 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.05■□□□□ -0
LSP1P33241 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.05■□□□□ -0
LSP1P33241 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.05■□□□□ -0
LSP1P33241 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.05■□□□□ -0
LSP1P33241 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.05■□□□□ -0
LSP1P33241 AL773604.1-201ENST00000617417 272 ntBASIC15.05■□□□□ -0
LSP1P33241 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
LSP1P33241 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LSP1P33241 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.05■□□□□ -0
LSP1P33241 CLK3P2-201ENST00000427566 1453 ntBASIC15.05■□□□□ -0
LSP1P33241 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LSP1P33241 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
LSP1P33241 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.05■□□□□ -0
LSP1P33241 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
LSP1P33241 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
LSP1P33241 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.05■□□□□ -0
LSP1P33241 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LSP1P33241 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms