Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.49■□□□□ 0.87
CPS1P31327 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CPS1P31327 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
CPS1P31327 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CPS1P31327 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPS1P31327 SNORA57-201ENST00000383870 149 ntBASIC20.49■□□□□ 0.87
CPS1P31327 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC20.49■□□□□ 0.87
CPS1P31327 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC20.49■□□□□ 0.87
CPS1P31327 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CPS1P31327 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC20.49■□□□□ 0.87
CPS1P31327 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CPS1P31327 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC20.49■□□□□ 0.87
CPS1P31327 URB1-AS1-201ENST00000534991 831 ntBASIC20.49■□□□□ 0.87
CPS1P31327 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CPS1P31327 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPS1P31327 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CPS1P31327 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CPS1P31327 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPS1P31327 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC20.49■□□□□ 0.87
CPS1P31327 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPS1P31327 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPS1P31327 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPS1P31327 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CPS1P31327 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
CPS1P31327 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC20.49■□□□□ 0.87
CPS1P31327 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
CPS1P31327 F10-203ENST00000409306 1450 ntTSL 3 BASIC20.49■□□□□ 0.87
CPS1P31327 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC20.49■□□□□ 0.87
CPS1P31327 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPS1P31327 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CPS1P31327 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPS1P31327 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC20.48■□□□□ 0.87
CPS1P31327 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.48■□□□□ 0.87
CPS1P31327 DOC2GP-204ENST00000639052 2548 ntBASIC20.48■□□□□ 0.87
CPS1P31327 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPS1P31327 PIFO-201ENST00000369737 746 ntTSL 2 BASIC20.48■□□□□ 0.87
CPS1P31327 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC20.48■□□□□ 0.87
CPS1P31327 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC20.48■□□□□ 0.87
CPS1P31327 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC20.48■□□□□ 0.87
CPS1P31327 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC20.48■□□□□ 0.87
CPS1P31327 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC20.48■□□□□ 0.87
CPS1P31327 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC20.48■□□□□ 0.87
CPS1P31327 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CPS1P31327 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CPS1P31327 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CPS1P31327 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPS1P31327 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC20.48■□□□□ 0.87
CPS1P31327 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC20.48■□□□□ 0.87
CPS1P31327 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPS1P31327 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPS1P31327 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CPS1P31327 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPS1P31327 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPS1P31327 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
CPS1P31327 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPS1P31327 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC20.48■□□□□ 0.87
CPS1P31327 PRAL-201ENST00000624952 3286 ntBASIC20.48■□□□□ 0.87
CPS1P31327 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CPS1P31327 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPS1P31327 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.48■□□□□ 0.87
CPS1P31327 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPS1P31327 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CPS1P31327 LINC01101-201ENST00000622953 1884 ntBASIC20.48■□□□□ 0.87
CPS1P31327 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CPS1P31327 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CPS1P31327 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC20.48■□□□□ 0.87
CPS1P31327 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPS1P31327 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CPS1P31327 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPS1P31327 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CPS1P31327 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPS1P31327 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CPS1P31327 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CPS1P31327 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC20.48■□□□□ 0.87
CPS1P31327 RN7SL277P-201ENST00000481521 288 ntBASIC20.48■□□□□ 0.87
CPS1P31327 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC20.48■□□□□ 0.87
CPS1P31327 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CPS1P31327 COX5A-205ENST00000568517 582 ntTSL 3 BASIC20.48■□□□□ 0.87
CPS1P31327 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPS1P31327 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CPS1P31327 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CPS1P31327 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPS1P31327 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CPS1P31327 AC092135.3-201ENST00000624151 1846 ntBASIC20.47■□□□□ 0.87
CPS1P31327 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPS1P31327 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC20.47■□□□□ 0.87
CPS1P31327 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CPS1P31327 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC20.47■□□□□ 0.87
CPS1P31327 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPS1P31327 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPS1P31327 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPS1P31327 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPS1P31327 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC20.47■□□□□ 0.87
CPS1P31327 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC20.47■□□□□ 0.87
CPS1P31327 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPS1P31327 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPS1P31327 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC20.47■□□□□ 0.87
CPS1P31327 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC20.47■□□□□ 0.87
CPS1P31327 AL512599.1-201ENST00000430724 685 ntBASIC20.47■□□□□ 0.87
CPS1P31327 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms