Protein–RNA interactions for Protein: P25105

PTAFR, Platelet-activating factor receptor, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTAFRP25105 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
PTAFRP25105 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.31□□□□□ -0.28
PTAFRP25105 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PTAFRP25105 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PTAFRP25105 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PTAFRP25105 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PTAFRP25105 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.31□□□□□ -0.28
PTAFRP25105 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.31□□□□□ -0.28
PTAFRP25105 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
PTAFRP25105 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
PTAFRP25105 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.31□□□□□ -0.28
PTAFRP25105 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PTAFRP25105 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PTAFRP25105 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PTAFRP25105 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PTAFRP25105 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PTAFRP25105 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.31□□□□□ -0.28
PTAFRP25105 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
PTAFRP25105 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
PTAFRP25105 ACTBP8-201ENST00000403258 1108 ntBASIC13.31□□□□□ -0.28
PTAFRP25105 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.31□□□□□ -0.28
PTAFRP25105 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PTAFRP25105 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
PTAFRP25105 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.31□□□□□ -0.28
PTAFRP25105 FO681548.1-201ENST00000455617 1132 ntBASIC13.31□□□□□ -0.28
PTAFRP25105 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PTAFRP25105 AC106760.1-201ENST00000508690 800 ntBASIC13.31□□□□□ -0.28
PTAFRP25105 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.31□□□□□ -0.28
PTAFRP25105 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.31□□□□□ -0.28
PTAFRP25105 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.31□□□□□ -0.28
PTAFRP25105 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
PTAFRP25105 SNX29P1-201ENST00000548357 1007 ntBASIC13.31□□□□□ -0.28
PTAFRP25105 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.31□□□□□ -0.28
PTAFRP25105 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.31□□□□□ -0.28
PTAFRP25105 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.31□□□□□ -0.28
PTAFRP25105 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
PTAFRP25105 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.31□□□□□ -0.28
PTAFRP25105 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.31□□□□□ -0.28
PTAFRP25105 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
PTAFRP25105 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PTAFRP25105 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.31□□□□□ -0.28
PTAFRP25105 AC093525.8-201ENST00000624099 1342 ntBASIC13.31□□□□□ -0.28
PTAFRP25105 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.31□□□□□ -0.28
PTAFRP25105 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PTAFRP25105 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PTAFRP25105 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PTAFRP25105 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PTAFRP25105 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PTAFRP25105 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PTAFRP25105 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PTAFRP25105 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PTAFRP25105 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PTAFRP25105 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PTAFRP25105 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PTAFRP25105 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
PTAFRP25105 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PTAFRP25105 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PTAFRP25105 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PTAFRP25105 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.3□□□□□ -0.28
PTAFRP25105 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
PTAFRP25105 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PTAFRP25105 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PTAFRP25105 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.3□□□□□ -0.28
PTAFRP25105 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PTAFRP25105 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PTAFRP25105 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PTAFRP25105 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PTAFRP25105 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.3□□□□□ -0.28
PTAFRP25105 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
PTAFRP25105 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
PTAFRP25105 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.3□□□□□ -0.28
PTAFRP25105 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PTAFRP25105 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.3□□□□□ -0.28
PTAFRP25105 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
PTAFRP25105 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PTAFRP25105 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
PTAFRP25105 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.3□□□□□ -0.28
PTAFRP25105 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PTAFRP25105 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.3□□□□□ -0.28
PTAFRP25105 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PTAFRP25105 AC007274.1-201ENST00000439805 662 ntBASIC13.3□□□□□ -0.28
PTAFRP25105 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.3□□□□□ -0.28
PTAFRP25105 AC119751.2-201ENST00000504529 210 ntBASIC13.3□□□□□ -0.28
PTAFRP25105 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
PTAFRP25105 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.3□□□□□ -0.28
PTAFRP25105 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.3□□□□□ -0.28
PTAFRP25105 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.3□□□□□ -0.28
PTAFRP25105 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.3□□□□□ -0.28
PTAFRP25105 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
PTAFRP25105 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.3□□□□□ -0.28
PTAFRP25105 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.3□□□□□ -0.28
PTAFRP25105 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.3□□□□□ -0.28
PTAFRP25105 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PTAFRP25105 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.3□□□□□ -0.28
PTAFRP25105 AC132938.4-201ENST00000623835 848 ntBASIC13.3□□□□□ -0.28
PTAFRP25105 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
PTAFRP25105 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.3□□□□□ -0.28
PTAFRP25105 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.3□□□□□ -0.28
PTAFRP25105 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PTAFRP25105 AC009090.5-201ENST00000624886 2285 ntBASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms