Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR4A1P22736 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR4A1P22736 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR4A1P22736 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.03□□□□□ -0.16
NR4A1P22736 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR4A1P22736 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.03□□□□□ -0.16
NR4A1P22736 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR4A1P22736 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR4A1P22736 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
NR4A1P22736 AL118506.1-201ENST00000601296 3082 ntBASIC14.03□□□□□ -0.16
NR4A1P22736 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR4A1P22736 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
NR4A1P22736 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NR4A1P22736 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NR4A1P22736 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR4A1P22736 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
NR4A1P22736 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.03□□□□□ -0.16
NR4A1P22736 AC107890.1-201ENST00000422478 521 ntBASIC14.03□□□□□ -0.16
NR4A1P22736 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.03□□□□□ -0.16
NR4A1P22736 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR4A1P22736 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
NR4A1P22736 AC125807.1-201ENST00000483097 614 ntBASIC14.03□□□□□ -0.16
NR4A1P22736 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.03□□□□□ -0.16
NR4A1P22736 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.03□□□□□ -0.16
NR4A1P22736 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.03□□□□□ -0.16
NR4A1P22736 AC140878.1-201ENST00000565277 250 ntBASIC14.03□□□□□ -0.16
NR4A1P22736 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.03□□□□□ -0.16
NR4A1P22736 AC061975.2-201ENST00000581722 295 ntBASIC14.03□□□□□ -0.16
NR4A1P22736 AC093512.1-201ENST00000617969 520 ntBASIC14.03□□□□□ -0.16
NR4A1P22736 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
NR4A1P22736 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR4A1P22736 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NR4A1P22736 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
NR4A1P22736 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR4A1P22736 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.03□□□□□ -0.16
NR4A1P22736 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.03□□□□□ -0.16
NR4A1P22736 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
NR4A1P22736 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR4A1P22736 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NR4A1P22736 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR4A1P22736 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.03□□□□□ -0.16
NR4A1P22736 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NR4A1P22736 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.03□□□□□ -0.16
NR4A1P22736 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.03□□□□□ -0.16
NR4A1P22736 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.03□□□□□ -0.16
NR4A1P22736 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.03□□□□□ -0.16
NR4A1P22736 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR4A1P22736 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
NR4A1P22736 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC14.03□□□□□ -0.16
NR4A1P22736 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR4A1P22736 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
NR4A1P22736 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NR4A1P22736 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
NR4A1P22736 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
NR4A1P22736 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
NR4A1P22736 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NR4A1P22736 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.02□□□□□ -0.16
NR4A1P22736 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NR4A1P22736 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.02□□□□□ -0.16
NR4A1P22736 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NR4A1P22736 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.02□□□□□ -0.16
NR4A1P22736 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NR4A1P22736 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
NR4A1P22736 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
NR4A1P22736 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NR4A1P22736 AL035456.1-201ENST00000456064 1369 ntBASIC14.02□□□□□ -0.17
NR4A1P22736 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NR4A1P22736 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NR4A1P22736 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR4A1P22736 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR4A1P22736 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR4A1P22736 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR4A1P22736 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NR4A1P22736 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
NR4A1P22736 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR4A1P22736 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
NR4A1P22736 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.02□□□□□ -0.17
NR4A1P22736 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.02□□□□□ -0.17
NR4A1P22736 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR4A1P22736 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.02□□□□□ -0.17
NR4A1P22736 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.02□□□□□ -0.17
NR4A1P22736 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR4A1P22736 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.02□□□□□ -0.17
NR4A1P22736 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.02□□□□□ -0.17
NR4A1P22736 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NR4A1P22736 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.02□□□□□ -0.17
NR4A1P22736 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.02□□□□□ -0.17
NR4A1P22736 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.02□□□□□ -0.17
NR4A1P22736 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.02□□□□□ -0.17
NR4A1P22736 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.02□□□□□ -0.17
NR4A1P22736 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR4A1P22736 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NR4A1P22736 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR4A1P22736 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR4A1P22736 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
NR4A1P22736 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
NR4A1P22736 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
NR4A1P22736 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.02□□□□□ -0.17
NR4A1P22736 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC14.02□□□□□ -0.17
NR4A1P22736 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms