Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB4AP20338 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC11.56□□□□□ -0.56
RAB4AP20338 GMPS-203ENST00000496455 8751 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB4AP20338 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB4AP20338 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB4AP20338 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB4AP20338 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB4AP20338 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
RAB4AP20338 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
RAB4AP20338 AL645939.2-201ENST00000427340 991 ntBASIC11.56□□□□□ -0.56
RAB4AP20338 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB4AP20338 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB4AP20338 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC11.56□□□□□ -0.56
RAB4AP20338 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
RAB4AP20338 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC11.56□□□□□ -0.56
RAB4AP20338 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB4AP20338 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC11.56□□□□□ -0.56
RAB4AP20338 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC11.56□□□□□ -0.56
RAB4AP20338 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC11.56□□□□□ -0.56
RAB4AP20338 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC11.56□□□□□ -0.56
RAB4AP20338 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC11.56□□□□□ -0.56
RAB4AP20338 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC11.56□□□□□ -0.56
RAB4AP20338 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC11.56□□□□□ -0.56
RAB4AP20338 MIR3180-1-201ENST00000580374 94 ntBASIC11.56□□□□□ -0.56
RAB4AP20338 MIR3180-3-201ENST00000584616 94 ntBASIC11.56□□□□□ -0.56
RAB4AP20338 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
RAB4AP20338 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
RAB4AP20338 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC11.56□□□□□ -0.56
RAB4AP20338 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC11.56□□□□□ -0.56
RAB4AP20338 LITAF-221ENST00000622633 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB4AP20338 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC11.56□□□□□ -0.56
RAB4AP20338 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC11.56□□□□□ -0.56
RAB4AP20338 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB4AP20338 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
RAB4AP20338 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
RAB4AP20338 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB4AP20338 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
RAB4AP20338 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC11.56□□□□□ -0.56
RAB4AP20338 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB4AP20338 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC11.56□□□□□ -0.56
RAB4AP20338 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB4AP20338 MDGA1-207ENST00000505425 3021 ntTSL 5 BASIC11.56□□□□□ -0.56
RAB4AP20338 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
RAB4AP20338 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB4AP20338 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB4AP20338 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC11.56□□□□□ -0.56
RAB4AP20338 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
RAB4AP20338 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
RAB4AP20338 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB4AP20338 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB4AP20338 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
RAB4AP20338 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
RAB4AP20338 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
RAB4AP20338 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB4AP20338 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB4AP20338 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
RAB4AP20338 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC11.55□□□□□ -0.56
RAB4AP20338 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC11.55□□□□□ -0.56
RAB4AP20338 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB4AP20338 ZNF646-201ENST00000300850 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB4AP20338 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB4AP20338 TMEM169-202ENST00000406027 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB4AP20338 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC11.55□□□□□ -0.56
RAB4AP20338 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB4AP20338 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB4AP20338 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB4AP20338 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB4AP20338 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
RAB4AP20338 VENTXP1-201ENST00000569334 2716 ntBASIC11.55□□□□□ -0.56
RAB4AP20338 ST3GAL1-211ENST00000522652 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB4AP20338 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC11.55□□□□□ -0.56
RAB4AP20338 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
RAB4AP20338 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
RAB4AP20338 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC11.55□□□□□ -0.56
RAB4AP20338 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB4AP20338 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB4AP20338 EMD-201ENST00000369835 966 ntTSL 3 BASIC11.55□□□□□ -0.56
RAB4AP20338 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB4AP20338 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB4AP20338 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB4AP20338 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC11.55□□□□□ -0.56
RAB4AP20338 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
RAB4AP20338 HS6ST1P1-201ENST00000481504 1234 ntBASIC11.55□□□□□ -0.56
RAB4AP20338 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC11.55□□□□□ -0.56
RAB4AP20338 SART3-203ENST00000546611 1184 ntBASIC11.55□□□□□ -0.56
RAB4AP20338 MIR4313-201ENST00000580760 101 ntBASIC11.55□□□□□ -0.56
RAB4AP20338 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC11.55□□□□□ -0.56
RAB4AP20338 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC11.55□□□□□ -0.56
RAB4AP20338 AC006557.2-201ENST00000592985 1240 ntBASIC11.55□□□□□ -0.56
RAB4AP20338 LRRN2-201ENST00000367175 5036 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
RAB4AP20338 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
RAB4AP20338 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
RAB4AP20338 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB4AP20338 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB4AP20338 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB4AP20338 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
RAB4AP20338 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB4AP20338 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB4AP20338 CPPED1-202ENST00000381774 6273 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB4AP20338 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms