Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD58P19256 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CD58P19256 AL365209.1-201ENST00000624418 6473 ntBASIC16.1■□□□□ 0.17
CD58P19256 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CD58P19256 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CD58P19256 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD58P19256 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD58P19256 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD58P19256 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
CD58P19256 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
CD58P19256 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.1■□□□□ 0.17
CD58P19256 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD58P19256 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.1■□□□□ 0.17
CD58P19256 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD58P19256 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.1■□□□□ 0.17
CD58P19256 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.1■□□□□ 0.17
CD58P19256 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.1■□□□□ 0.17
CD58P19256 HILS1-202ENST00000545329 423 ntBASIC16.1■□□□□ 0.17
CD58P19256 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CD58P19256 RN7SL48P-201ENST00000579283 293 ntBASIC16.1■□□□□ 0.17
CD58P19256 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CD58P19256 AC239800.4-201ENST00000603712 296 ntBASIC16.1■□□□□ 0.17
CD58P19256 AL512343.1-201ENST00000605837 169 ntBASIC16.1■□□□□ 0.17
CD58P19256 AL162274.1-201ENST00000617191 1098 ntBASIC16.1■□□□□ 0.17
CD58P19256 AL390755.1-201ENST00000623716 2027 ntBASIC16.1■□□□□ 0.17
CD58P19256 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD58P19256 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD58P19256 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CD58P19256 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD58P19256 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD58P19256 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD58P19256 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CD58P19256 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CD58P19256 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD58P19256 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD58P19256 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CD58P19256 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CD58P19256 AC007292.2-201ENST00000593524 1812 ntBASIC16.1■□□□□ 0.17
CD58P19256 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC16.1■□□□□ 0.17
CD58P19256 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CD58P19256 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.09■□□□□ 0.17
CD58P19256 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.09■□□□□ 0.17
CD58P19256 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD58P19256 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CD58P19256 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD58P19256 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.09■□□□□ 0.17
CD58P19256 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.09■□□□□ 0.17
CD58P19256 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CD58P19256 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD58P19256 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CD58P19256 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD58P19256 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.09■□□□□ 0.17
CD58P19256 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD58P19256 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD58P19256 AC079776.1-201ENST00000401540 1152 ntBASIC16.09■□□□□ 0.17
CD58P19256 POM121L8P-201ENST00000417732 1281 ntBASIC16.09■□□□□ 0.17
CD58P19256 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.09■□□□□ 0.17
CD58P19256 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.09■□□□□ 0.17
CD58P19256 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.09■□□□□ 0.17
CD58P19256 POM121L9P-203ENST00000441984 1285 ntBASIC16.09■□□□□ 0.17
CD58P19256 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.09■□□□□ 0.17
CD58P19256 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CD58P19256 KRT90P-201ENST00000549264 1064 ntBASIC16.09■□□□□ 0.17
CD58P19256 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD58P19256 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.09■□□□□ 0.17
CD58P19256 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.09■□□□□ 0.17
CD58P19256 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.09■□□□□ 0.17
CD58P19256 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD58P19256 CLUHP2-201ENST00000426660 1303 ntBASIC16.09■□□□□ 0.17
CD58P19256 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD58P19256 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CD58P19256 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CD58P19256 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CD58P19256 AC232323.1-201ENST00000540724 2099 ntBASIC16.09■□□□□ 0.17
CD58P19256 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CD58P19256 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD58P19256 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD58P19256 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD58P19256 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CD58P19256 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
CD58P19256 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
CD58P19256 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CD58P19256 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CD58P19256 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CD58P19256 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CD58P19256 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CD58P19256 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD58P19256 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.08■□□□□ 0.16
CD58P19256 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.08■□□□□ 0.16
CD58P19256 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD58P19256 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.08■□□□□ 0.16
CD58P19256 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD58P19256 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD58P19256 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.08■□□□□ 0.16
CD58P19256 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CD58P19256 AC078819.1-201ENST00000547454 765 ntBASIC16.08■□□□□ 0.16
CD58P19256 AC012085.1-201ENST00000548270 765 ntBASIC16.08■□□□□ 0.16
CD58P19256 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.08■□□□□ 0.16
CD58P19256 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.08■□□□□ 0.16
CD58P19256 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms