Protein–RNA interactions for Protein: P17538

CTRB1, Chymotrypsinogen B, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTRB1P17538 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTRB1P17538 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTRB1P17538 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTRB1P17538 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTRB1P17538 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTRB1P17538 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTRB1P17538 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC12.68□□□□□ -0.38
CTRB1P17538 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC12.68□□□□□ -0.38
CTRB1P17538 ALG1L5P-201ENST00000482043 771 ntBASIC12.68□□□□□ -0.38
CTRB1P17538 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.68□□□□□ -0.38
CTRB1P17538 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC12.68□□□□□ -0.38
CTRB1P17538 EHF-205ENST00000527935 557 ntTSL 2 BASIC12.68□□□□□ -0.38
CTRB1P17538 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12.68□□□□□ -0.38
CTRB1P17538 CALM1-205ENST00000553542 877 ntTSL 5 BASIC12.68□□□□□ -0.38
CTRB1P17538 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.68□□□□□ -0.38
CTRB1P17538 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CTRB1P17538 AC084121.4-201ENST00000641598 221 ntBASIC12.68□□□□□ -0.38
CTRB1P17538 AF228730.8-201ENST00000642140 221 ntBASIC12.68□□□□□ -0.38
CTRB1P17538 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTRB1P17538 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC12.68□□□□□ -0.38
CTRB1P17538 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTRB1P17538 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.68□□□□□ -0.38
CTRB1P17538 AL691432.1-201ENST00000596308 1422 ntBASIC12.68□□□□□ -0.38
CTRB1P17538 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CTRB1P17538 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CTRB1P17538 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTRB1P17538 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CTRB1P17538 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTRB1P17538 ELL2P1-201ENST00000413990 1906 ntBASIC12.68□□□□□ -0.38
CTRB1P17538 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTRB1P17538 KIF25-AS1-202ENST00000456585 2795 ntTSL 2 BASIC12.68□□□□□ -0.38
CTRB1P17538 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTRB1P17538 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CTRB1P17538 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CTRB1P17538 AL022323.5-201ENST00000624101 2059 ntBASIC12.68□□□□□ -0.38
CTRB1P17538 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.68□□□□□ -0.38
CTRB1P17538 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CTRB1P17538 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CTRB1P17538 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CTRB1P17538 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.67□□□□□ -0.38
CTRB1P17538 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.67□□□□□ -0.38
CTRB1P17538 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTRB1P17538 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CTRB1P17538 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC12.67□□□□□ -0.38
CTRB1P17538 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CTRB1P17538 AC068760.1-201ENST00000493579 1953 ntBASIC12.67□□□□□ -0.38
CTRB1P17538 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC12.67□□□□□ -0.38
CTRB1P17538 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTRB1P17538 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CTRB1P17538 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
CTRB1P17538 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTRB1P17538 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTRB1P17538 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.67□□□□□ -0.38
CTRB1P17538 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.67□□□□□ -0.38
CTRB1P17538 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.67□□□□□ -0.38
CTRB1P17538 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CTRB1P17538 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC12.67□□□□□ -0.38
CTRB1P17538 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CTRB1P17538 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTRB1P17538 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC12.67□□□□□ -0.38
CTRB1P17538 DNAJB3-201ENST00000446806 729 ntBASIC12.67□□□□□ -0.38
CTRB1P17538 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.67□□□□□ -0.38
CTRB1P17538 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC12.67□□□□□ -0.38
CTRB1P17538 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTRB1P17538 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CTRB1P17538 AC005829.1-201ENST00000570002 483 ntBASIC12.67□□□□□ -0.38
CTRB1P17538 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTRB1P17538 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC12.67□□□□□ -0.38
CTRB1P17538 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC12.67□□□□□ -0.38
CTRB1P17538 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTRB1P17538 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.67□□□□□ -0.38
CTRB1P17538 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTRB1P17538 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CTRB1P17538 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
CTRB1P17538 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC12.67□□□□□ -0.38
CTRB1P17538 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTRB1P17538 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CTRB1P17538 LINC00477-201ENST00000483544 1710 ntTSL 2 BASIC12.67□□□□□ -0.38
CTRB1P17538 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CTRB1P17538 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTRB1P17538 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTRB1P17538 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC12.67□□□□□ -0.38
CTRB1P17538 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC12.67□□□□□ -0.38
CTRB1P17538 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTRB1P17538 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CTRB1P17538 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.67□□□□□ -0.38
CTRB1P17538 UBTFL8-201ENST00000426903 2112 ntBASIC12.67□□□□□ -0.38
CTRB1P17538 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CTRB1P17538 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTRB1P17538 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CTRB1P17538 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CTRB1P17538 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CTRB1P17538 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC12.66□□□□□ -0.38
CTRB1P17538 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC12.66□□□□□ -0.38
CTRB1P17538 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CTRB1P17538 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CTRB1P17538 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.66□□□□□ -0.38
CTRB1P17538 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CTRB1P17538 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CTRB1P17538 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms