Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD28P10747 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD28P10747 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC11.73□□□□□ -0.53
CD28P10747 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CD28P10747 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
CD28P10747 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD28P10747 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD28P10747 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC11.73□□□□□ -0.53
CD28P10747 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CD28P10747 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD28P10747 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD28P10747 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
CD28P10747 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
CD28P10747 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
CD28P10747 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC11.73□□□□□ -0.53
CD28P10747 CHMP1AP1-201ENST00000445563 662 ntBASIC11.73□□□□□ -0.53
CD28P10747 EIF4HP1-201ENST00000453115 687 ntBASIC11.73□□□□□ -0.53
CD28P10747 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC11.73□□□□□ -0.53
CD28P10747 BX284668.4-201ENST00000453917 508 ntBASIC11.73□□□□□ -0.53
CD28P10747 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC11.73□□□□□ -0.53
CD28P10747 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC11.73□□□□□ -0.53
CD28P10747 MESTP3-201ENST00000503460 968 ntBASIC11.73□□□□□ -0.53
CD28P10747 AC044849.1-201ENST00000519737 1188 ntBASIC11.73□□□□□ -0.53
CD28P10747 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC11.73□□□□□ -0.53
CD28P10747 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC11.73□□□□□ -0.53
CD28P10747 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC11.73□□□□□ -0.53
CD28P10747 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC11.73□□□□□ -0.53
CD28P10747 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC11.73□□□□□ -0.53
CD28P10747 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
CD28P10747 DUX4L47-201ENST00000566374 394 ntBASIC11.73□□□□□ -0.53
CD28P10747 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD28P10747 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC11.73□□□□□ -0.53
CD28P10747 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC11.73□□□□□ -0.53
CD28P10747 KLK11-210ENST00000600362 759 ntTSL 3 BASIC11.73□□□□□ -0.53
CD28P10747 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC11.73□□□□□ -0.53
CD28P10747 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD28P10747 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CD28P10747 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC11.73□□□□□ -0.53
CD28P10747 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD28P10747 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD28P10747 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
CD28P10747 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
CD28P10747 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD28P10747 AC144831.1-201ENST00000573312 2656 ntBASIC11.73□□□□□ -0.53
CD28P10747 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD28P10747 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD28P10747 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD28P10747 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD28P10747 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC11.72□□□□□ -0.53
CD28P10747 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC11.72□□□□□ -0.53
CD28P10747 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD28P10747 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
CD28P10747 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC11.72□□□□□ -0.53
CD28P10747 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD28P10747 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CD28P10747 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC11.72□□□□□ -0.53
CD28P10747 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CD28P10747 AC090616.6-203ENST00000579186 1945 ntBASIC11.72□□□□□ -0.53
CD28P10747 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC11.72□□□□□ -0.53
CD28P10747 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD28P10747 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CD28P10747 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD28P10747 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC11.72□□□□□ -0.53
CD28P10747 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD28P10747 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
CD28P10747 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CD28P10747 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CD28P10747 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC11.72□□□□□ -0.53
CD28P10747 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC11.72□□□□□ -0.53
CD28P10747 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC11.72□□□□□ -0.53
CD28P10747 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD28P10747 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD28P10747 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC11.72□□□□□ -0.53
CD28P10747 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CD28P10747 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CD28P10747 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD28P10747 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD28P10747 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC11.72□□□□□ -0.53
CD28P10747 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CD28P10747 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
CD28P10747 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD28P10747 AL136309.1-201ENST00000403917 691 ntBASIC11.72□□□□□ -0.53
CD28P10747 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
CD28P10747 NKAIN1P1-201ENST00000435754 582 ntBASIC11.72□□□□□ -0.53
CD28P10747 REEP1-202ENST00000453231 940 ntTSL 2 BASIC11.72□□□□□ -0.53
CD28P10747 AC021723.1-201ENST00000486306 515 ntBASIC11.72□□□□□ -0.53
CD28P10747 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC11.72□□□□□ -0.53
CD28P10747 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC11.72□□□□□ -0.53
CD28P10747 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC11.72□□□□□ -0.53
CD28P10747 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD28P10747 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC11.72□□□□□ -0.53
CD28P10747 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC11.72□□□□□ -0.53
CD28P10747 MIR4683-201ENST00000579659 81 ntBASIC11.72□□□□□ -0.53
CD28P10747 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC11.72□□□□□ -0.53
CD28P10747 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
CD28P10747 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CD28P10747 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD28P10747 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD28P10747 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
CD28P10747 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms