Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CD48P09326 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD48P09326 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD48P09326 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD48P09326 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CD48P09326 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CD48P09326 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.49■□□□□ 0.07
CD48P09326 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.49■□□□□ 0.07
CD48P09326 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.49■□□□□ 0.07
CD48P09326 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD48P09326 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.49■□□□□ 0.07
CD48P09326 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CD48P09326 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.49■□□□□ 0.07
CD48P09326 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.49■□□□□ 0.07
CD48P09326 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD48P09326 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.49■□□□□ 0.07
CD48P09326 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CD48P09326 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CD48P09326 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.49■□□□□ 0.07
CD48P09326 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.49■□□□□ 0.07
CD48P09326 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.49■□□□□ 0.07
CD48P09326 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CD48P09326 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CD48P09326 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD48P09326 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD48P09326 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.49■□□□□ 0.07
CD48P09326 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD48P09326 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD48P09326 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD48P09326 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD48P09326 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.49■□□□□ 0.07
CD48P09326 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD48P09326 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD48P09326 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CD48P09326 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CD48P09326 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CD48P09326 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD48P09326 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD48P09326 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD48P09326 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD48P09326 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.49■□□□□ 0.07
CD48P09326 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CD48P09326 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD48P09326 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.49■□□□□ 0.07
CD48P09326 HSPA7-201ENST00000445535 1927 ntBASIC15.49■□□□□ 0.07
CD48P09326 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
CD48P09326 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD48P09326 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CD48P09326 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CD48P09326 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CD48P09326 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CD48P09326 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.48■□□□□ 0.07
CD48P09326 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.48■□□□□ 0.07
CD48P09326 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CD48P09326 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CD48P09326 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CD48P09326 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CD48P09326 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
CD48P09326 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
CD48P09326 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CD48P09326 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CD48P09326 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CD48P09326 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CD48P09326 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CD48P09326 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CD48P09326 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CD48P09326 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.48■□□□□ 0.07
CD48P09326 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.48■□□□□ 0.07
CD48P09326 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.48■□□□□ 0.07
CD48P09326 INE1-201ENST00000456273 945 ntBASIC15.48■□□□□ 0.07
CD48P09326 RN7SL692P-201ENST00000464677 288 ntBASIC15.48■□□□□ 0.07
CD48P09326 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.48■□□□□ 0.07
CD48P09326 AC131206.1-201ENST00000538078 1211 ntBASIC15.48■□□□□ 0.07
CD48P09326 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.48■□□□□ 0.07
CD48P09326 AC132938.2-201ENST00000579188 680 ntBASIC15.48■□□□□ 0.07
CD48P09326 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CD48P09326 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CD48P09326 ENPP7P14-201ENST00000621765 1040 ntBASIC15.48■□□□□ 0.07
CD48P09326 AL591163.1-201ENST00000641757 987 ntBASIC15.48■□□□□ 0.07
CD48P09326 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.48■□□□□ 0.07
CD48P09326 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.48■□□□□ 0.07
CD48P09326 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CD48P09326 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
CD48P09326 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.48■□□□□ 0.07
CD48P09326 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.48■□□□□ 0.07
CD48P09326 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CD48P09326 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.48■□□□□ 0.07
CD48P09326 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.48■□□□□ 0.07
CD48P09326 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CD48P09326 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CD48P09326 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CD48P09326 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CD48P09326 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CD48P09326 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CD48P09326 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CD48P09326 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CD48P09326 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CD48P09326 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.47■□□□□ 0.07
CD48P09326 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.47■□□□□ 0.07
CD48P09326 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms