Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 REXO1L4P-201ENST00000605109 1937 ntBASIC13.12□□□□□ -0.31
SFTPBP07988 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SFTPBP07988 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SFTPBP07988 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
SFTPBP07988 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SFTPBP07988 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SFTPBP07988 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.12□□□□□ -0.31
SFTPBP07988 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.12□□□□□ -0.31
SFTPBP07988 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SFTPBP07988 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.12□□□□□ -0.31
SFTPBP07988 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SFTPBP07988 GNAQP1-201ENST00000444815 1067 ntBASIC13.12□□□□□ -0.31
SFTPBP07988 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.12□□□□□ -0.31
SFTPBP07988 KRT18P43-201ENST00000469825 1281 ntBASIC13.12□□□□□ -0.31
SFTPBP07988 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.12□□□□□ -0.31
SFTPBP07988 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.12□□□□□ -0.31
SFTPBP07988 AC190387.1-201ENST00000551683 408 ntBASIC13.12□□□□□ -0.31
SFTPBP07988 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.12□□□□□ -0.31
SFTPBP07988 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SFTPBP07988 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SFTPBP07988 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SFTPBP07988 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SFTPBP07988 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SFTPBP07988 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SFTPBP07988 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.12□□□□□ -0.31
SFTPBP07988 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SFTPBP07988 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.12□□□□□ -0.31
SFTPBP07988 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.12□□□□□ -0.31
SFTPBP07988 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SFTPBP07988 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SFTPBP07988 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SFTPBP07988 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SFTPBP07988 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SFTPBP07988 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SFTPBP07988 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
SFTPBP07988 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SFTPBP07988 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SFTPBP07988 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SFTPBP07988 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SFTPBP07988 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SFTPBP07988 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SFTPBP07988 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
SFTPBP07988 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SFTPBP07988 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SFTPBP07988 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SFTPBP07988 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SFTPBP07988 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SFTPBP07988 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SFTPBP07988 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SFTPBP07988 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SFTPBP07988 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.11□□□□□ -0.31
SFTPBP07988 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SFTPBP07988 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.11□□□□□ -0.31
SFTPBP07988 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
SFTPBP07988 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
SFTPBP07988 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SFTPBP07988 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SFTPBP07988 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.11□□□□□ -0.31
SFTPBP07988 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SFTPBP07988 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SFTPBP07988 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
SFTPBP07988 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SFTPBP07988 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
SFTPBP07988 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SFTPBP07988 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SFTPBP07988 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SFTPBP07988 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.11□□□□□ -0.31
SFTPBP07988 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
SFTPBP07988 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.11□□□□□ -0.31
SFTPBP07988 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.11□□□□□ -0.31
SFTPBP07988 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.11□□□□□ -0.31
SFTPBP07988 SDHAP3-202ENST00000515467 728 ntBASIC13.11□□□□□ -0.31
SFTPBP07988 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.11□□□□□ -0.31
SFTPBP07988 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
SFTPBP07988 ZNF890P-202ENST00000530367 1156 ntBASIC13.11□□□□□ -0.31
SFTPBP07988 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.11□□□□□ -0.31
SFTPBP07988 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.11□□□□□ -0.31
SFTPBP07988 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.11□□□□□ -0.31
SFTPBP07988 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.11□□□□□ -0.31
SFTPBP07988 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SFTPBP07988 AC239800.4-201ENST00000603712 296 ntBASIC13.11□□□□□ -0.31
SFTPBP07988 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.11□□□□□ -0.31
SFTPBP07988 AC004790.1-201ENST00000612686 536 ntBASIC13.11□□□□□ -0.31
SFTPBP07988 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
SFTPBP07988 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.11□□□□□ -0.31
SFTPBP07988 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SFTPBP07988 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.11□□□□□ -0.31
SFTPBP07988 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SFTPBP07988 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SFTPBP07988 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
SFTPBP07988 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.11□□□□□ -0.31
SFTPBP07988 AC140479.7-201ENST00000636301 2332 ntBASIC13.11□□□□□ -0.31
SFTPBP07988 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SFTPBP07988 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SFTPBP07988 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SFTPBP07988 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SFTPBP07988 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SFTPBP07988 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SFTPBP07988 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SFTPBP07988 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms