Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TPM2P07951 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.15■□□□□ 0.34
TPM2P07951 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPM2P07951 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPM2P07951 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TPM2P07951 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TPM2P07951 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TPM2P07951 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPM2P07951 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TPM2P07951 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC17.14■□□□□ 0.33
TPM2P07951 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.14■□□□□ 0.33
TPM2P07951 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TPM2P07951 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM2P07951 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TPM2P07951 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC17.14■□□□□ 0.33
TPM2P07951 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
TPM2P07951 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM2P07951 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.14■□□□□ 0.33
TPM2P07951 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.14■□□□□ 0.33
TPM2P07951 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.14■□□□□ 0.33
TPM2P07951 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM2P07951 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM2P07951 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM2P07951 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TPM2P07951 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM2P07951 SPDYE17-201ENST00000412399 783 ntBASIC17.14■□□□□ 0.33
TPM2P07951 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.14■□□□□ 0.33
TPM2P07951 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.14■□□□□ 0.33
TPM2P07951 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.14■□□□□ 0.33
TPM2P07951 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.14■□□□□ 0.33
TPM2P07951 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.14■□□□□ 0.33
TPM2P07951 PGAM5P1-201ENST00000518923 814 ntBASIC17.14■□□□□ 0.33
TPM2P07951 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.14■□□□□ 0.33
TPM2P07951 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TPM2P07951 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.14■□□□□ 0.33
TPM2P07951 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC17.14■□□□□ 0.33
TPM2P07951 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.14■□□□□ 0.33
TPM2P07951 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM2P07951 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TPM2P07951 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TPM2P07951 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TPM2P07951 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM2P07951 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
TPM2P07951 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM2P07951 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TPM2P07951 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TPM2P07951 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM2P07951 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM2P07951 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM2P07951 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM2P07951 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC17.14■□□□□ 0.33
TPM2P07951 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC17.14■□□□□ 0.33
TPM2P07951 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM2P07951 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.14■□□□□ 0.33
TPM2P07951 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
TPM2P07951 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM2P07951 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPM2P07951 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TPM2P07951 OS9-218ENST00000551035 2246 ntTSL 2 BASIC17.13■□□□□ 0.33
TPM2P07951 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TPM2P07951 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
TPM2P07951 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TPM2P07951 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM2P07951 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM2P07951 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM2P07951 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM2P07951 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.13■□□□□ 0.33
TPM2P07951 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TPM2P07951 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC17.13■□□□□ 0.33
TPM2P07951 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM2P07951 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TPM2P07951 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM2P07951 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM2P07951 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TPM2P07951 MIR574-201ENST00000385209 96 ntBASIC17.13■□□□□ 0.33
TPM2P07951 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM2P07951 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.13■□□□□ 0.33
TPM2P07951 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.13■□□□□ 0.33
TPM2P07951 RBPMS2P1-201ENST00000437762 623 ntBASIC17.13■□□□□ 0.33
TPM2P07951 MTND6P24-201ENST00000440466 518 ntBASIC17.13■□□□□ 0.33
TPM2P07951 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TPM2P07951 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.13■□□□□ 0.33
TPM2P07951 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.13■□□□□ 0.33
TPM2P07951 TMEM198B-204ENST00000484016 896 ntBASIC17.13■□□□□ 0.33
TPM2P07951 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.13■□□□□ 0.33
TPM2P07951 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.13■□□□□ 0.33
TPM2P07951 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM2P07951 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.13■□□□□ 0.33
TPM2P07951 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TPM2P07951 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.13■□□□□ 0.33
TPM2P07951 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.13■□□□□ 0.33
TPM2P07951 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.13■□□□□ 0.33
TPM2P07951 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TPM2P07951 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TPM2P07951 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
TPM2P07951 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TPM2P07951 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC17.13■□□□□ 0.33
TPM2P07951 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM2P07951 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
TPM2P07951 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms