Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.82□□□□□ -0.04
CAPN1P07384 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.82□□□□□ -0.04
CAPN1P07384 MIR4259-201ENST00000584466 101 ntBASIC14.82□□□□□ -0.04
CAPN1P07384 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CAPN1P07384 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.82□□□□□ -0.04
CAPN1P07384 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN1P07384 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.82□□□□□ -0.04
CAPN1P07384 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN1P07384 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.82□□□□□ -0.04
CAPN1P07384 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.82□□□□□ -0.04
CAPN1P07384 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.82□□□□□ -0.04
CAPN1P07384 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN1P07384 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.82□□□□□ -0.04
CAPN1P07384 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN1P07384 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN1P07384 LILRP1-201ENST00000444199 1370 ntBASIC14.82□□□□□ -0.04
CAPN1P07384 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN1P07384 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN1P07384 KRT8P22-201ENST00000562317 1415 ntBASIC14.82□□□□□ -0.04
CAPN1P07384 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.82□□□□□ -0.04
CAPN1P07384 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN1P07384 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN1P07384 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN1P07384 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
CAPN1P07384 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN1P07384 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN1P07384 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.82□□□□□ -0.04
CAPN1P07384 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CAPN1P07384 AC018442.1-201ENST00000421439 2061 ntBASIC14.81□□□□□ -0.04
CAPN1P07384 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.81□□□□□ -0.04
CAPN1P07384 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN1P07384 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.81□□□□□ -0.04
CAPN1P07384 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.81□□□□□ -0.04
CAPN1P07384 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
CAPN1P07384 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN1P07384 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CAPN1P07384 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN1P07384 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN1P07384 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.81□□□□□ -0.04
CAPN1P07384 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN1P07384 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
CAPN1P07384 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN1P07384 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN1P07384 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN1P07384 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN1P07384 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN1P07384 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN1P07384 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.81□□□□□ -0.04
CAPN1P07384 MIR658-201ENST00000385210 100 ntBASIC14.81□□□□□ -0.04
CAPN1P07384 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.81□□□□□ -0.04
CAPN1P07384 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.81□□□□□ -0.04
CAPN1P07384 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
CAPN1P07384 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.81□□□□□ -0.04
CAPN1P07384 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.81□□□□□ -0.04
CAPN1P07384 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN1P07384 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.81□□□□□ -0.04
CAPN1P07384 AC133539.2-201ENST00000604757 467 ntBASIC14.81□□□□□ -0.04
CAPN1P07384 MIR6805-201ENST00000615055 62 ntBASIC14.81□□□□□ -0.04
CAPN1P07384 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.81□□□□□ -0.04
CAPN1P07384 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
CAPN1P07384 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN1P07384 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN1P07384 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
CAPN1P07384 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN1P07384 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN1P07384 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN1P07384 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.81□□□□□ -0.04
CAPN1P07384 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN1P07384 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN1P07384 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN1P07384 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN1P07384 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CAPN1P07384 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.81□□□□□ -0.04
CAPN1P07384 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CAPN1P07384 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CAPN1P07384 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN1P07384 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN1P07384 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN1P07384 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN1P07384 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN1P07384 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN1P07384 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.8□□□□□ -0.04
CAPN1P07384 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.8□□□□□ -0.04
CAPN1P07384 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN1P07384 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN1P07384 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN1P07384 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN1P07384 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN1P07384 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CAPN1P07384 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.8□□□□□ -0.04
CAPN1P07384 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.8□□□□□ -0.04
CAPN1P07384 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.8□□□□□ -0.04
CAPN1P07384 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN1P07384 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.8□□□□□ -0.04
CAPN1P07384 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN1P07384 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
CAPN1P07384 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.8□□□□□ -0.04
CAPN1P07384 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CAPN1P07384 ACTG1P3-201ENST00000431775 1114 ntBASIC14.8□□□□□ -0.04
CAPN1P07384 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms