Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD74P04233 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CD74P04233 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.61□□□□□ -0.39
CD74P04233 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CD74P04233 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD74P04233 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CD74P04233 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD74P04233 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD74P04233 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CD74P04233 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CD74P04233 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD74P04233 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CD74P04233 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CD74P04233 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.61□□□□□ -0.39
CD74P04233 FDX1P1-201ENST00000449115 551 ntBASIC12.61□□□□□ -0.39
CD74P04233 SERBP1P3-201ENST00000459980 809 ntBASIC12.61□□□□□ -0.39
CD74P04233 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD74P04233 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.61□□□□□ -0.39
CD74P04233 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.61□□□□□ -0.39
CD74P04233 GATD1-206ENST00000526325 756 ntTSL 5 BASIC12.61□□□□□ -0.39
CD74P04233 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC12.61□□□□□ -0.39
CD74P04233 KLK8-205ENST00000593490 267 ntTSL 3 BASIC12.61□□□□□ -0.39
CD74P04233 AC092364.2-202ENST00000597012 1073 ntBASIC12.61□□□□□ -0.39
CD74P04233 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.61□□□□□ -0.39
CD74P04233 AL033527.5-202ENST00000641632 1098 ntBASIC12.61□□□□□ -0.39
CD74P04233 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD74P04233 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CD74P04233 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD74P04233 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
CD74P04233 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD74P04233 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD74P04233 AC004241.5-201ENST00000623870 2448 ntBASIC12.61□□□□□ -0.39
CD74P04233 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CD74P04233 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD74P04233 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.61□□□□□ -0.39
CD74P04233 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD74P04233 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.61□□□□□ -0.39
CD74P04233 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.61□□□□□ -0.39
CD74P04233 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD74P04233 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD74P04233 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CD74P04233 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD74P04233 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.61□□□□□ -0.39
CD74P04233 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD74P04233 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CD74P04233 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CD74P04233 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CD74P04233 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CD74P04233 AC083964.2-201ENST00000623988 2396 ntBASIC12.61□□□□□ -0.39
CD74P04233 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
CD74P04233 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD74P04233 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD74P04233 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
CD74P04233 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.6□□□□□ -0.39
CD74P04233 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD74P04233 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD74P04233 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
CD74P04233 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.6□□□□□ -0.39
CD74P04233 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.6□□□□□ -0.39
CD74P04233 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD74P04233 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD74P04233 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CD74P04233 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.6□□□□□ -0.39
CD74P04233 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD74P04233 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD74P04233 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
CD74P04233 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CD74P04233 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CD74P04233 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CD74P04233 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.6□□□□□ -0.39
CD74P04233 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC12.6□□□□□ -0.39
CD74P04233 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CD74P04233 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.6□□□□□ -0.39
CD74P04233 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
CD74P04233 RPL13AP23-201ENST00000480739 586 ntBASIC12.6□□□□□ -0.39
CD74P04233 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.6□□□□□ -0.39
CD74P04233 GAPDHP40-201ENST00000505218 1006 ntBASIC12.6□□□□□ -0.39
CD74P04233 TSFM-210ENST00000550559 897 ntTSL 5 BASIC12.6□□□□□ -0.39
CD74P04233 RPL18-209ENST00000550645 463 ntTSL 5 BASIC12.6□□□□□ -0.39
CD74P04233 RPL18-214ENST00000552588 559 ntTSL 3 BASIC12.6□□□□□ -0.39
CD74P04233 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC12.6□□□□□ -0.39
CD74P04233 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD74P04233 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC12.6□□□□□ -0.39
CD74P04233 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD74P04233 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CD74P04233 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD74P04233 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD74P04233 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD74P04233 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD74P04233 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.6□□□□□ -0.39
CD74P04233 AC093525.8-201ENST00000624099 1342 ntBASIC12.6□□□□□ -0.39
CD74P04233 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD74P04233 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD74P04233 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD74P04233 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD74P04233 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD74P04233 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CD74P04233 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
CD74P04233 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD74P04233 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms