Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
APOEP02649 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
APOEP02649 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
APOEP02649 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.74■□□□□ 0.11
APOEP02649 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
APOEP02649 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.74■□□□□ 0.11
APOEP02649 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
APOEP02649 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.74■□□□□ 0.11
APOEP02649 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
APOEP02649 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
APOEP02649 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.74■□□□□ 0.11
APOEP02649 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
APOEP02649 LILRP1-201ENST00000444199 1370 ntBASIC15.74■□□□□ 0.11
APOEP02649 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
APOEP02649 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
APOEP02649 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
APOEP02649 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.73■□□□□ 0.11
APOEP02649 AC007686.3-201ENST00000619017 3487 ntBASIC15.73■□□□□ 0.11
APOEP02649 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.73■□□□□ 0.11
APOEP02649 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.73■□□□□ 0.11
APOEP02649 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
APOEP02649 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
APOEP02649 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.73■□□□□ 0.11
APOEP02649 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.73■□□□□ 0.11
APOEP02649 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
APOEP02649 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
APOEP02649 TPM3P8-201ENST00000330554 643 ntBASIC15.73■□□□□ 0.11
APOEP02649 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
APOEP02649 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
APOEP02649 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
APOEP02649 MIR1909-201ENST00000411312 80 ntBASIC15.73■□□□□ 0.11
APOEP02649 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
APOEP02649 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
APOEP02649 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.73■□□□□ 0.11
APOEP02649 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
APOEP02649 RPL7P3-201ENST00000441388 714 ntBASIC15.73■□□□□ 0.11
APOEP02649 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.73■□□□□ 0.11
APOEP02649 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.73■□□□□ 0.11
APOEP02649 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.73■□□□□ 0.11
APOEP02649 DUX4L47-201ENST00000566374 394 ntBASIC15.73■□□□□ 0.11
APOEP02649 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.73■□□□□ 0.11
APOEP02649 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.73■□□□□ 0.11
APOEP02649 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.73■□□□□ 0.11
APOEP02649 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
APOEP02649 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
APOEP02649 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
APOEP02649 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.73■□□□□ 0.11
APOEP02649 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
APOEP02649 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
APOEP02649 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
APOEP02649 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
APOEP02649 AC026748.1-201ENST00000624349 3251 ntBASIC15.73■□□□□ 0.11
APOEP02649 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
APOEP02649 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
APOEP02649 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
APOEP02649 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
APOEP02649 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
APOEP02649 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
APOEP02649 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
APOEP02649 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
APOEP02649 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.73■□□□□ 0.11
APOEP02649 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.73■□□□□ 0.11
APOEP02649 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
APOEP02649 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
APOEP02649 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
APOEP02649 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.72■□□□□ 0.11
APOEP02649 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
APOEP02649 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
APOEP02649 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
APOEP02649 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.72■□□□□ 0.11
APOEP02649 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.72■□□□□ 0.11
APOEP02649 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
APOEP02649 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
APOEP02649 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.72■□□□□ 0.11
APOEP02649 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
APOEP02649 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
APOEP02649 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
APOEP02649 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
APOEP02649 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
APOEP02649 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
APOEP02649 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.72■□□□□ 0.11
APOEP02649 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.72■□□□□ 0.11
APOEP02649 AC245100.3-201ENST00000441281 285 ntBASIC15.72■□□□□ 0.11
APOEP02649 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.72■□□□□ 0.11
APOEP02649 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.72■□□□□ 0.11
APOEP02649 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.72■□□□□ 0.11
APOEP02649 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.72■□□□□ 0.11
APOEP02649 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.72■□□□□ 0.11
APOEP02649 AP005482.1-201ENST00000563722 1273 ntBASIC15.72■□□□□ 0.11
APOEP02649 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.72■□□□□ 0.11
APOEP02649 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.72■□□□□ 0.11
APOEP02649 AC133552.6-201ENST00000613406 534 ntBASIC15.72■□□□□ 0.11
APOEP02649 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
APOEP02649 ENPP7P14-201ENST00000621765 1040 ntBASIC15.72■□□□□ 0.11
APOEP02649 AC138951.2-201ENST00000623455 1161 ntBASIC15.72■□□□□ 0.11
APOEP02649 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
APOEP02649 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
APOEP02649 ACE3P-201ENST00000423435 1973 ntBASIC15.72■□□□□ 0.11
APOEP02649 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.72■□□□□ 0.11
APOEP02649 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms