Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
POLR1AO95602 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC21.19■□□□□ 0.98
POLR1AO95602 PEBP1P2-201ENST00000603980 558 ntBASIC21.19■□□□□ 0.98
POLR1AO95602 HMGB1P24-201ENST00000611897 328 ntBASIC21.19■□□□□ 0.98
POLR1AO95602 AC002044.2-201ENST00000624910 970 ntBASIC21.19■□□□□ 0.98
POLR1AO95602 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC21.19■□□□□ 0.98
POLR1AO95602 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
POLR1AO95602 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
POLR1AO95602 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC21.19■□□□□ 0.98
POLR1AO95602 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
POLR1AO95602 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC21.19■□□□□ 0.98
POLR1AO95602 CICP23-201ENST00000605013 2741 ntBASIC21.19■□□□□ 0.98
POLR1AO95602 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
POLR1AO95602 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC21.19■□□□□ 0.98
POLR1AO95602 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC21.19■□□□□ 0.98
POLR1AO95602 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC21.19■□□□□ 0.98
POLR1AO95602 AC144522.1-201ENST00000625111 1658 ntBASIC21.19■□□□□ 0.98
POLR1AO95602 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
POLR1AO95602 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC21.19■□□□□ 0.98
POLR1AO95602 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC21.19■□□□□ 0.98
POLR1AO95602 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
POLR1AO95602 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC21.19■□□□□ 0.98
POLR1AO95602 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
POLR1AO95602 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
POLR1AO95602 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
POLR1AO95602 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
POLR1AO95602 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
POLR1AO95602 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC21.18■□□□□ 0.98
POLR1AO95602 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC21.18■□□□□ 0.98
POLR1AO95602 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC21.18■□□□□ 0.98
POLR1AO95602 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC21.18■□□□□ 0.98
POLR1AO95602 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
POLR1AO95602 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
POLR1AO95602 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
POLR1AO95602 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
POLR1AO95602 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
POLR1AO95602 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
POLR1AO95602 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.18■□□□□ 0.98
POLR1AO95602 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
POLR1AO95602 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC21.18■□□□□ 0.98
POLR1AO95602 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
POLR1AO95602 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
POLR1AO95602 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
POLR1AO95602 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
POLR1AO95602 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
POLR1AO95602 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
POLR1AO95602 AL357373.1-201ENST00000394974 322 ntBASIC21.18■□□□□ 0.98
POLR1AO95602 RN7SKP109-201ENST00000410592 316 ntBASIC21.18■□□□□ 0.98
POLR1AO95602 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
POLR1AO95602 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC21.18■□□□□ 0.98
POLR1AO95602 MT3-203ENST00000565838 421 ntTSL 3 BASIC21.18■□□□□ 0.98
POLR1AO95602 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC21.18■□□□□ 0.98
POLR1AO95602 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC21.17■□□□□ 0.98
POLR1AO95602 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC21.17■□□□□ 0.98
POLR1AO95602 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
POLR1AO95602 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
POLR1AO95602 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
POLR1AO95602 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
POLR1AO95602 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC21.17■□□□□ 0.98
POLR1AO95602 FAM90A21P-201ENST00000510875 1396 ntBASIC21.17■□□□□ 0.98
POLR1AO95602 FAM90A15P-201ENST00000514465 1395 ntBASIC21.17■□□□□ 0.98
POLR1AO95602 FAM90A6P-201ENST00000515148 1394 ntBASIC21.17■□□□□ 0.98
POLR1AO95602 FAM90A16P-201ENST00000526662 1395 ntBASIC21.17■□□□□ 0.98
POLR1AO95602 FAM90A9P-201ENST00000527940 1395 ntBASIC21.17■□□□□ 0.98
POLR1AO95602 FAM90A5P-201ENST00000528738 1395 ntBASIC21.17■□□□□ 0.98
POLR1AO95602 FAM90A14P-201ENST00000530386 1395 ntBASIC21.17■□□□□ 0.98
POLR1AO95602 FAM90A13P-201ENST00000534703 1395 ntBASIC21.17■□□□□ 0.98
POLR1AO95602 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC21.17■□□□□ 0.98
POLR1AO95602 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC21.17■□□□□ 0.98
POLR1AO95602 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
POLR1AO95602 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
POLR1AO95602 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
POLR1AO95602 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
POLR1AO95602 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC21.17■□□□□ 0.98
POLR1AO95602 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC21.17■□□□□ 0.98
POLR1AO95602 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
POLR1AO95602 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC21.17■□□□□ 0.98
POLR1AO95602 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC21.17■□□□□ 0.98
POLR1AO95602 PTPN20CP-201ENST00000614090 920 ntBASIC21.17■□□□□ 0.98
POLR1AO95602 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC21.17■□□□□ 0.98
POLR1AO95602 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC21.17■□□□□ 0.98
POLR1AO95602 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
POLR1AO95602 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC21.17■□□□□ 0.98
POLR1AO95602 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC21.17■□□□□ 0.98
POLR1AO95602 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
POLR1AO95602 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
POLR1AO95602 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
POLR1AO95602 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
POLR1AO95602 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
POLR1AO95602 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
POLR1AO95602 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC21.16■□□□□ 0.98
POLR1AO95602 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC21.16■□□□□ 0.98
POLR1AO95602 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC21.16■□□□□ 0.98
POLR1AO95602 AC012073.1-201ENST00000606114 1108 ntBASIC21.16■□□□□ 0.98
POLR1AO95602 AC002472.4-201ENST00000641915 272 ntBASIC21.16■□□□□ 0.98
POLR1AO95602 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
POLR1AO95602 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC21.16■□□□□ 0.98
POLR1AO95602 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC21.16■□□□□ 0.98
POLR1AO95602 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
POLR1AO95602 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms