Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UPK1BO75841 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UPK1BO75841 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
UPK1BO75841 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
UPK1BO75841 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
UPK1BO75841 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UPK1BO75841 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UPK1BO75841 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
UPK1BO75841 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
UPK1BO75841 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UPK1BO75841 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.04□□□□□ -0.32
UPK1BO75841 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC13.04□□□□□ -0.32
UPK1BO75841 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
UPK1BO75841 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UPK1BO75841 F2-205ENST00000530231 1849 ntTSL 5 BASIC13.04□□□□□ -0.32
UPK1BO75841 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UPK1BO75841 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
UPK1BO75841 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.04□□□□□ -0.32
UPK1BO75841 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC13.03□□□□□ -0.32
UPK1BO75841 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
UPK1BO75841 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
UPK1BO75841 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.03□□□□□ -0.32
UPK1BO75841 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
UPK1BO75841 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
UPK1BO75841 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
UPK1BO75841 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UPK1BO75841 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
UPK1BO75841 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UPK1BO75841 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UPK1BO75841 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.03□□□□□ -0.32
UPK1BO75841 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UPK1BO75841 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.03□□□□□ -0.32
UPK1BO75841 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UPK1BO75841 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC13.03□□□□□ -0.32
UPK1BO75841 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
UPK1BO75841 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UPK1BO75841 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UPK1BO75841 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC13.03□□□□□ -0.32
UPK1BO75841 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
UPK1BO75841 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
UPK1BO75841 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC13.03□□□□□ -0.32
UPK1BO75841 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.03□□□□□ -0.32
UPK1BO75841 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
UPK1BO75841 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
UPK1BO75841 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
UPK1BO75841 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
UPK1BO75841 IGHV3-65-201ENST00000523210 341 ntBASIC13.03□□□□□ -0.32
UPK1BO75841 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
UPK1BO75841 CYGB-205ENST00000590175 830 ntTSL 3 BASIC13.03□□□□□ -0.32
UPK1BO75841 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.03□□□□□ -0.32
UPK1BO75841 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
UPK1BO75841 AC074044.1-201ENST00000609673 707 ntBASIC13.03□□□□□ -0.32
UPK1BO75841 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.03□□□□□ -0.32
UPK1BO75841 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
UPK1BO75841 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UPK1BO75841 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
UPK1BO75841 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
UPK1BO75841 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UPK1BO75841 DNM1P41-201ENST00000623634 3350 ntBASIC13.03□□□□□ -0.32
UPK1BO75841 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UPK1BO75841 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
UPK1BO75841 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
UPK1BO75841 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
UPK1BO75841 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
UPK1BO75841 AL355102.3-201ENST00000554299 1678 ntBASIC13.02□□□□□ -0.32
UPK1BO75841 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
UPK1BO75841 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
UPK1BO75841 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
UPK1BO75841 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
UPK1BO75841 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
UPK1BO75841 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC13.02□□□□□ -0.32
UPK1BO75841 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
UPK1BO75841 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
UPK1BO75841 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
UPK1BO75841 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
UPK1BO75841 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
UPK1BO75841 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UPK1BO75841 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UPK1BO75841 MRPL20P1-201ENST00000400819 433 ntBASIC13.02□□□□□ -0.33
UPK1BO75841 AZGP1P1-201ENST00000411909 902 ntBASIC13.02□□□□□ -0.33
UPK1BO75841 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC13.02□□□□□ -0.33
UPK1BO75841 LINC00265-3P-201ENST00000447588 903 ntBASIC13.02□□□□□ -0.33
UPK1BO75841 AL136038.3-201ENST00000561909 1096 ntBASIC13.02□□□□□ -0.33
UPK1BO75841 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
UPK1BO75841 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
UPK1BO75841 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC13.02□□□□□ -0.33
UPK1BO75841 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.02□□□□□ -0.33
UPK1BO75841 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UPK1BO75841 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
UPK1BO75841 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
UPK1BO75841 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
UPK1BO75841 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
UPK1BO75841 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
UPK1BO75841 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
UPK1BO75841 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UPK1BO75841 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC13.02□□□□□ -0.33
UPK1BO75841 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC13.02□□□□□ -0.33
UPK1BO75841 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.02□□□□□ -0.33
UPK1BO75841 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
UPK1BO75841 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms