Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.79■□□□□ 0.28
ACTN4O43707 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ACTN4O43707 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ACTN4O43707 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ACTN4O43707 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ACTN4O43707 AL138725.1-201ENST00000407347 1314 ntBASIC16.79■□□□□ 0.28
ACTN4O43707 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ACTN4O43707 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ACTN4O43707 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
ACTN4O43707 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ACTN4O43707 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ACTN4O43707 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ACTN4O43707 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ACTN4O43707 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ACTN4O43707 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.79■□□□□ 0.28
ACTN4O43707 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
ACTN4O43707 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.79■□□□□ 0.28
ACTN4O43707 AC007969.1-201ENST00000433675 447 ntBASIC16.79■□□□□ 0.28
ACTN4O43707 AC002472.2-201ENST00000442739 958 ntBASIC16.79■□□□□ 0.28
ACTN4O43707 AC093433.1-201ENST00000458048 571 ntBASIC16.79■□□□□ 0.28
ACTN4O43707 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ACTN4O43707 SPCS2P1-201ENST00000561636 679 ntBASIC16.79■□□□□ 0.28
ACTN4O43707 AL096865.1-201ENST00000606796 927 ntBASIC16.79■□□□□ 0.28
ACTN4O43707 RPSAP52-203ENST00000622976 1023 ntBASIC16.79■□□□□ 0.28
ACTN4O43707 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ACTN4O43707 AC092135.3-201ENST00000624151 1846 ntBASIC16.79■□□□□ 0.28
ACTN4O43707 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ACTN4O43707 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
ACTN4O43707 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ACTN4O43707 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ACTN4O43707 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ACTN4O43707 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ACTN4O43707 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
ACTN4O43707 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
ACTN4O43707 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
ACTN4O43707 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
ACTN4O43707 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ACTN4O43707 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC16.78■□□□□ 0.28
ACTN4O43707 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ACTN4O43707 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ACTN4O43707 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
ACTN4O43707 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ACTN4O43707 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ACTN4O43707 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ACTN4O43707 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ACTN4O43707 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ACTN4O43707 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ACTN4O43707 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ACTN4O43707 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ACTN4O43707 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ACTN4O43707 KRT8P35-201ENST00000483942 1338 ntBASIC16.78■□□□□ 0.28
ACTN4O43707 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ACTN4O43707 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ACTN4O43707 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ACTN4O43707 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ACTN4O43707 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ACTN4O43707 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ACTN4O43707 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ACTN4O43707 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ACTN4O43707 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ACTN4O43707 RN7SKP230-201ENST00000365642 335 ntBASIC16.78■□□□□ 0.28
ACTN4O43707 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ACTN4O43707 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ACTN4O43707 AC236430.1-201ENST00000402231 743 ntBASIC16.78■□□□□ 0.28
ACTN4O43707 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.78■□□□□ 0.28
ACTN4O43707 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.78■□□□□ 0.28
ACTN4O43707 FO681548.1-201ENST00000455617 1132 ntBASIC16.78■□□□□ 0.28
ACTN4O43707 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ACTN4O43707 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ACTN4O43707 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ACTN4O43707 AC131206.1-201ENST00000538078 1211 ntBASIC16.78■□□□□ 0.28
ACTN4O43707 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.78■□□□□ 0.28
ACTN4O43707 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
ACTN4O43707 CU634019.7-201ENST00000624153 1185 ntBASIC16.78■□□□□ 0.28
ACTN4O43707 FP236241.2-201ENST00000624906 1185 ntBASIC16.78■□□□□ 0.28
ACTN4O43707 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
ACTN4O43707 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ACTN4O43707 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ACTN4O43707 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ACTN4O43707 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ACTN4O43707 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
ACTN4O43707 AC005840.4-201ENST00000541242 2494 ntBASIC16.78■□□□□ 0.28
ACTN4O43707 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ACTN4O43707 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.78■□□□□ 0.28
ACTN4O43707 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.78■□□□□ 0.28
ACTN4O43707 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
ACTN4O43707 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.78■□□□□ 0.28
ACTN4O43707 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ACTN4O43707 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC16.78■□□□□ 0.28
ACTN4O43707 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ACTN4O43707 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ACTN4O43707 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.78■□□□□ 0.28
ACTN4O43707 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ACTN4O43707 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ACTN4O43707 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC16.77■□□□□ 0.28
ACTN4O43707 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ACTN4O43707 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.77■□□□□ 0.28
ACTN4O43707 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ACTN4O43707 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ACTN4O43707 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms