Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RIPK2O43353 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RIPK2O43353 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
RIPK2O43353 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.23■□□□□ 0.03
RIPK2O43353 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RIPK2O43353 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
RIPK2O43353 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RIPK2O43353 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
RIPK2O43353 AC011840.2-201ENST00000563063 1520 ntBASIC15.22■□□□□ 0.03
RIPK2O43353 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RIPK2O43353 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RIPK2O43353 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
RIPK2O43353 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RIPK2O43353 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RIPK2O43353 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.22■□□□□ 0.03
RIPK2O43353 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RIPK2O43353 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC15.22■□□□□ 0.03
RIPK2O43353 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RIPK2O43353 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RIPK2O43353 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RIPK2O43353 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.22■□□□□ 0.03
RIPK2O43353 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RIPK2O43353 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.22■□□□□ 0.03
RIPK2O43353 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
RIPK2O43353 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.22■□□□□ 0.03
RIPK2O43353 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RIPK2O43353 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RIPK2O43353 AC023141.5-201ENST00000458585 616 ntBASIC15.22■□□□□ 0.03
RIPK2O43353 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.22■□□□□ 0.03
RIPK2O43353 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.22■□□□□ 0.03
RIPK2O43353 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.22■□□□□ 0.03
RIPK2O43353 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.22■□□□□ 0.03
RIPK2O43353 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.22■□□□□ 0.03
RIPK2O43353 SPDYE12P-201ENST00000618416 771 ntBASIC15.22■□□□□ 0.03
RIPK2O43353 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
RIPK2O43353 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RIPK2O43353 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC15.22■□□□□ 0.03
RIPK2O43353 CROT-203ENST00000419147 2959 ntTSL 2 BASIC15.22■□□□□ 0.03
RIPK2O43353 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RIPK2O43353 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC15.22■□□□□ 0.03
RIPK2O43353 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RIPK2O43353 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RIPK2O43353 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC15.22■□□□□ 0.03
RIPK2O43353 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RIPK2O43353 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RIPK2O43353 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RIPK2O43353 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC15.22■□□□□ 0.03
RIPK2O43353 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RIPK2O43353 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RIPK2O43353 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RIPK2O43353 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.21■□□□□ 0.03
RIPK2O43353 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RIPK2O43353 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RIPK2O43353 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RIPK2O43353 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RIPK2O43353 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RIPK2O43353 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RIPK2O43353 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RIPK2O43353 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RIPK2O43353 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
RIPK2O43353 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
RIPK2O43353 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RIPK2O43353 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RIPK2O43353 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.21■□□□□ 0.03
RIPK2O43353 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RIPK2O43353 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RIPK2O43353 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RIPK2O43353 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
RIPK2O43353 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RIPK2O43353 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC15.21■□□□□ 0.03
RIPK2O43353 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RIPK2O43353 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.21■□□□□ 0.03
RIPK2O43353 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RIPK2O43353 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.21■□□□□ 0.03
RIPK2O43353 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.21■□□□□ 0.03
RIPK2O43353 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RIPK2O43353 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.21■□□□□ 0.03
RIPK2O43353 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.21■□□□□ 0.03
RIPK2O43353 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.21■□□□□ 0.03
RIPK2O43353 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.21■□□□□ 0.03
RIPK2O43353 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RIPK2O43353 POLD2P1-201ENST00000511220 997 ntBASIC15.21■□□□□ 0.03
RIPK2O43353 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RIPK2O43353 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.21■□□□□ 0.03
RIPK2O43353 KRT18P58-201ENST00000527480 1120 ntBASIC15.21■□□□□ 0.03
RIPK2O43353 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.21■□□□□ 0.03
RIPK2O43353 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RIPK2O43353 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RIPK2O43353 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RIPK2O43353 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RIPK2O43353 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RIPK2O43353 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RIPK2O43353 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RIPK2O43353 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
RIPK2O43353 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
RIPK2O43353 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
RIPK2O43353 AC111170.3-201ENST00000624282 2464 ntBASIC15.21■□□□□ 0.02
RIPK2O43353 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
RIPK2O43353 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RIPK2O43353 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms