Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
E2F3O00716 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
E2F3O00716 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
E2F3O00716 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.63□□□□□ -0.07
E2F3O00716 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
E2F3O00716 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
E2F3O00716 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
E2F3O00716 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
E2F3O00716 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
E2F3O00716 TMEM14DP-201ENST00000422205 345 ntBASIC14.63□□□□□ -0.07
E2F3O00716 EIF3FP3-201ENST00000434851 1086 ntBASIC14.63□□□□□ -0.07
E2F3O00716 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.63□□□□□ -0.07
E2F3O00716 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.63□□□□□ -0.07
E2F3O00716 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.63□□□□□ -0.07
E2F3O00716 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.63□□□□□ -0.07
E2F3O00716 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.63□□□□□ -0.07
E2F3O00716 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.63□□□□□ -0.07
E2F3O00716 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.63□□□□□ -0.07
E2F3O00716 CTBP2P3-201ENST00000585629 1255 ntBASIC14.63□□□□□ -0.07
E2F3O00716 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.63□□□□□ -0.07
E2F3O00716 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
E2F3O00716 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.63□□□□□ -0.07
E2F3O00716 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.63□□□□□ -0.07
E2F3O00716 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
E2F3O00716 TMEM261P1-201ENST00000604899 340 ntBASIC14.63□□□□□ -0.07
E2F3O00716 AL603764.1-201ENST00000636452 321 ntBASIC14.63□□□□□ -0.07
E2F3O00716 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
E2F3O00716 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
E2F3O00716 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
E2F3O00716 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
E2F3O00716 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.63□□□□□ -0.07
E2F3O00716 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
E2F3O00716 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
E2F3O00716 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.63□□□□□ -0.07
E2F3O00716 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
E2F3O00716 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
E2F3O00716 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
E2F3O00716 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
E2F3O00716 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.63□□□□□ -0.07
E2F3O00716 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
E2F3O00716 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.63□□□□□ -0.07
E2F3O00716 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
E2F3O00716 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
E2F3O00716 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
E2F3O00716 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.62□□□□□ -0.07
E2F3O00716 AGGF1P1-201ENST00000509500 2073 ntBASIC14.62□□□□□ -0.07
E2F3O00716 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.62□□□□□ -0.07
E2F3O00716 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
E2F3O00716 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
E2F3O00716 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.62□□□□□ -0.07
E2F3O00716 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
E2F3O00716 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
E2F3O00716 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
E2F3O00716 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
E2F3O00716 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
E2F3O00716 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.62□□□□□ -0.07
E2F3O00716 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
E2F3O00716 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
E2F3O00716 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
E2F3O00716 MYCLP2-201ENST00000449268 967 ntBASIC14.62□□□□□ -0.07
E2F3O00716 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
E2F3O00716 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
E2F3O00716 AC022447.6-201ENST00000515522 438 ntBASIC14.62□□□□□ -0.07
E2F3O00716 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.62□□□□□ -0.07
E2F3O00716 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.62□□□□□ -0.07
E2F3O00716 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
E2F3O00716 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.62□□□□□ -0.07
E2F3O00716 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.62□□□□□ -0.07
E2F3O00716 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
E2F3O00716 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
E2F3O00716 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.62□□□□□ -0.07
E2F3O00716 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
E2F3O00716 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
E2F3O00716 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
E2F3O00716 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
E2F3O00716 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
E2F3O00716 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
E2F3O00716 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
E2F3O00716 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
E2F3O00716 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
E2F3O00716 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.62□□□□□ -0.07
E2F3O00716 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
E2F3O00716 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
E2F3O00716 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
E2F3O00716 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
E2F3O00716 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
E2F3O00716 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
E2F3O00716 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
E2F3O00716 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
E2F3O00716 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
E2F3O00716 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
E2F3O00716 AC152010.1-201ENST00000415779 2006 ntBASIC14.61□□□□□ -0.07
E2F3O00716 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.61□□□□□ -0.07
E2F3O00716 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
E2F3O00716 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
E2F3O00716 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
E2F3O00716 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
E2F3O00716 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.61□□□□□ -0.07
E2F3O00716 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.61□□□□□ -0.07
E2F3O00716 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms