Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN5O00501 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
CLDN5O00501 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN5O00501 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CLDN5O00501 E2F3P2-201ENST00000447755 1422 ntBASIC15.74■□□□□ 0.11
CLDN5O00501 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.74■□□□□ 0.11
CLDN5O00501 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CLDN5O00501 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN5O00501 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
CLDN5O00501 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN5O00501 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN5O00501 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN5O00501 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN5O00501 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.74■□□□□ 0.11
CLDN5O00501 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CLDN5O00501 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN5O00501 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN5O00501 MTHFR-210ENST00000641407 2387 ntBASIC15.73■□□□□ 0.11
CLDN5O00501 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN5O00501 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN5O00501 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN5O00501 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN5O00501 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.73■□□□□ 0.11
CLDN5O00501 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN5O00501 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN5O00501 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN5O00501 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN5O00501 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.73■□□□□ 0.11
CLDN5O00501 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN5O00501 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.73■□□□□ 0.11
CLDN5O00501 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN5O00501 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN5O00501 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.73■□□□□ 0.11
CLDN5O00501 MIR663B-201ENST00000408361 115 ntBASIC15.73■□□□□ 0.11
CLDN5O00501 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
CLDN5O00501 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN5O00501 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN5O00501 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.73■□□□□ 0.11
CLDN5O00501 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.73■□□□□ 0.11
CLDN5O00501 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.73■□□□□ 0.11
CLDN5O00501 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.73■□□□□ 0.11
CLDN5O00501 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.73■□□□□ 0.11
CLDN5O00501 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.73■□□□□ 0.11
CLDN5O00501 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN5O00501 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN5O00501 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CLDN5O00501 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CLDN5O00501 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN5O00501 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN5O00501 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
CLDN5O00501 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.73■□□□□ 0.11
CLDN5O00501 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.73■□□□□ 0.11
CLDN5O00501 CICP24-201ENST00000605464 2705 ntBASIC15.73■□□□□ 0.11
CLDN5O00501 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CLDN5O00501 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN5O00501 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.72■□□□□ 0.11
CLDN5O00501 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.72■□□□□ 0.11
CLDN5O00501 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CLDN5O00501 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN5O00501 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN5O00501 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN5O00501 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CLDN5O00501 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
CLDN5O00501 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN5O00501 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CLDN5O00501 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.72■□□□□ 0.11
CLDN5O00501 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN5O00501 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CLDN5O00501 SHC1P1-201ENST00000425230 1745 ntBASIC15.72■□□□□ 0.11
CLDN5O00501 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.72■□□□□ 0.11
CLDN5O00501 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.72■□□□□ 0.11
CLDN5O00501 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN5O00501 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN5O00501 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.72■□□□□ 0.11
CLDN5O00501 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.72■□□□□ 0.11
CLDN5O00501 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN5O00501 ZNF767P-206ENST00000513792 565 ntBASIC15.72■□□□□ 0.11
CLDN5O00501 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.72■□□□□ 0.11
CLDN5O00501 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.72■□□□□ 0.11
CLDN5O00501 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN5O00501 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.72■□□□□ 0.11
CLDN5O00501 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
CLDN5O00501 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.72■□□□□ 0.11
CLDN5O00501 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.72■□□□□ 0.11
CLDN5O00501 MIR4525-201ENST00000580000 75 ntBASIC15.72■□□□□ 0.11
CLDN5O00501 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN5O00501 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.72■□□□□ 0.11
CLDN5O00501 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
CLDN5O00501 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.72■□□□□ 0.11
CLDN5O00501 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN5O00501 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN5O00501 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CLDN5O00501 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CLDN5O00501 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CLDN5O00501 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN5O00501 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CLDN5O00501 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN5O00501 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.71■□□□□ 0.11
CLDN5O00501 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN5O00501 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms