Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PIK3C2AO00443 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PIK3C2AO00443 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PIK3C2AO00443 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
PIK3C2AO00443 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PIK3C2AO00443 AC025183.3-201ENST00000623526 1482 ntBASIC19.46■□□□□ 0.71
PIK3C2AO00443 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PIK3C2AO00443 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PIK3C2AO00443 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PIK3C2AO00443 AC108734.2-201ENST00000420887 1069 ntBASIC19.46■□□□□ 0.71
PIK3C2AO00443 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC19.46■□□□□ 0.71
PIK3C2AO00443 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC19.46■□□□□ 0.71
PIK3C2AO00443 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC19.46■□□□□ 0.71
PIK3C2AO00443 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC19.46■□□□□ 0.71
PIK3C2AO00443 AC021016.3-201ENST00000608367 477 ntBASIC19.46■□□□□ 0.71
PIK3C2AO00443 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PIK3C2AO00443 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PIK3C2AO00443 AC006372.4-201ENST00000624122 1543 ntBASIC19.46■□□□□ 0.7
PIK3C2AO00443 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PIK3C2AO00443 AC064801.2-201ENST00000625052 1303 ntBASIC19.45■□□□□ 0.7
PIK3C2AO00443 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.45■□□□□ 0.7
PIK3C2AO00443 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PIK3C2AO00443 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PIK3C2AO00443 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PIK3C2AO00443 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PIK3C2AO00443 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PIK3C2AO00443 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PIK3C2AO00443 AC022532.1-201ENST00000624563 1728 ntBASIC19.45■□□□□ 0.7
PIK3C2AO00443 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PIK3C2AO00443 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PIK3C2AO00443 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PIK3C2AO00443 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC19.45■□□□□ 0.7
PIK3C2AO00443 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PIK3C2AO00443 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC19.45■□□□□ 0.7
PIK3C2AO00443 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC19.45■□□□□ 0.7
PIK3C2AO00443 AL157792.1-201ENST00000488281 530 ntBASIC19.45■□□□□ 0.7
PIK3C2AO00443 PGAM1P12-201ENST00000505622 748 ntBASIC19.45■□□□□ 0.7
PIK3C2AO00443 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC19.45■□□□□ 0.7
PIK3C2AO00443 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC19.45■□□□□ 0.7
PIK3C2AO00443 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PIK3C2AO00443 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
PIK3C2AO00443 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PIK3C2AO00443 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PIK3C2AO00443 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC19.45■□□□□ 0.7
PIK3C2AO00443 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PIK3C2AO00443 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC19.44■□□□□ 0.7
PIK3C2AO00443 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC19.44■□□□□ 0.7
PIK3C2AO00443 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PIK3C2AO00443 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PIK3C2AO00443 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PIK3C2AO00443 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PIK3C2AO00443 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PIK3C2AO00443 PSMD4P1-201ENST00000433951 1109 ntBASIC19.44■□□□□ 0.7
PIK3C2AO00443 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC19.44■□□□□ 0.7
PIK3C2AO00443 OR5BD1P-201ENST00000532527 817 ntBASIC19.44■□□□□ 0.7
PIK3C2AO00443 HERC2P11-201ENST00000562845 725 ntBASIC19.44■□□□□ 0.7
PIK3C2AO00443 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC19.44■□□□□ 0.7
PIK3C2AO00443 AL022344.2-201ENST00000568976 968 ntBASIC19.44■□□□□ 0.7
PIK3C2AO00443 AC100756.2-201ENST00000569537 736 ntBASIC19.44■□□□□ 0.7
PIK3C2AO00443 RN7SL357P-201ENST00000581065 298 ntBASIC19.44■□□□□ 0.7
PIK3C2AO00443 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PIK3C2AO00443 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PIK3C2AO00443 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PIK3C2AO00443 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PIK3C2AO00443 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PIK3C2AO00443 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PIK3C2AO00443 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PIK3C2AO00443 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PIK3C2AO00443 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC19.44■□□□□ 0.7
PIK3C2AO00443 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PIK3C2AO00443 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PIK3C2AO00443 CCT8L1P-201ENST00000465400 1674 ntBASIC19.43■□□□□ 0.7
PIK3C2AO00443 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PIK3C2AO00443 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC19.43■□□□□ 0.7
PIK3C2AO00443 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC19.43■□□□□ 0.7
PIK3C2AO00443 REEP5-205ENST00000504247 480 ntTSL 5 BASIC19.43■□□□□ 0.7
PIK3C2AO00443 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC19.43■□□□□ 0.7
PIK3C2AO00443 AC140658.4-201ENST00000561990 352 ntBASIC19.43■□□□□ 0.7
PIK3C2AO00443 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC19.43■□□□□ 0.7
PIK3C2AO00443 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
PIK3C2AO00443 TEKT4P2-202ENST00000559466 1312 ntBASIC19.43■□□□□ 0.7
PIK3C2AO00443 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PIK3C2AO00443 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PIK3C2AO00443 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PIK3C2AO00443 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PIK3C2AO00443 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC19.43■□□□□ 0.7
PIK3C2AO00443 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC19.43■□□□□ 0.7
PIK3C2AO00443 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.43■□□□□ 0.7
PIK3C2AO00443 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PIK3C2AO00443 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PIK3C2AO00443 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC19.43■□□□□ 0.7
PIK3C2AO00443 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PIK3C2AO00443 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PIK3C2AO00443 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PIK3C2AO00443 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PIK3C2AO00443 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC19.43■□□□□ 0.7
PIK3C2AO00443 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PIK3C2AO00443 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PIK3C2AO00443 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PIK3C2AO00443 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms