Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC188H7C350 AL138799.1-201ENST00000448213 1675 ntBASIC15.59■□□□□ 0.09
CCDC188H7C350 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CCDC188H7C350 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.59■□□□□ 0.09
CCDC188H7C350 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC188H7C350 HADH-202ENST00000403312 1752 ntTSL 5 BASIC15.59■□□□□ 0.09
CCDC188H7C350 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC188H7C350 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC188H7C350 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.59■□□□□ 0.09
CCDC188H7C350 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.59■□□□□ 0.09
CCDC188H7C350 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CCDC188H7C350 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CCDC188H7C350 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CCDC188H7C350 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
CCDC188H7C350 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CCDC188H7C350 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CCDC188H7C350 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
CCDC188H7C350 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CCDC188H7C350 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC188H7C350 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC188H7C350 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.08
CCDC188H7C350 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.58■□□□□ 0.08
CCDC188H7C350 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC188H7C350 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC188H7C350 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC188H7C350 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC188H7C350 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC188H7C350 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC188H7C350 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.58■□□□□ 0.08
CCDC188H7C350 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.58■□□□□ 0.08
CCDC188H7C350 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.58■□□□□ 0.08
CCDC188H7C350 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.58■□□□□ 0.08
CCDC188H7C350 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC188H7C350 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CCDC188H7C350 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC188H7C350 AC044860.1-202ENST00000559481 777 ntBASIC15.58■□□□□ 0.08
CCDC188H7C350 DUX4L47-201ENST00000566374 394 ntBASIC15.58■□□□□ 0.08
CCDC188H7C350 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC188H7C350 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.58■□□□□ 0.08
CCDC188H7C350 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC188H7C350 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CCDC188H7C350 AC215219.1-201ENST00000400706 1817 ntBASIC15.58■□□□□ 0.08
CCDC188H7C350 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC188H7C350 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CCDC188H7C350 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC15.58■□□□□ 0.08
CCDC188H7C350 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC188H7C350 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC188H7C350 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.58■□□□□ 0.08
CCDC188H7C350 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CCDC188H7C350 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CCDC188H7C350 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC188H7C350 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC188H7C350 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.57■□□□□ 0.08
CCDC188H7C350 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC188H7C350 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CCDC188H7C350 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC188H7C350 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC188H7C350 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC188H7C350 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC188H7C350 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC15.57■□□□□ 0.08
CCDC188H7C350 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC188H7C350 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC188H7C350 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC188H7C350 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CCDC188H7C350 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC188H7C350 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
CCDC188H7C350 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC188H7C350 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC188H7C350 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC188H7C350 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC188H7C350 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.57■□□□□ 0.08
CCDC188H7C350 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC188H7C350 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC188H7C350 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.57■□□□□ 0.08
CCDC188H7C350 AL391069.4-201ENST00000609583 481 ntBASIC15.57■□□□□ 0.08
CCDC188H7C350 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.57■□□□□ 0.08
CCDC188H7C350 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC188H7C350 AC073592.8-201ENST00000624126 511 ntBASIC15.57■□□□□ 0.08
CCDC188H7C350 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.57■□□□□ 0.08
CCDC188H7C350 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC188H7C350 AC087499.5-201ENST00000452760 1342 ntBASIC15.57■□□□□ 0.08
CCDC188H7C350 KRT8P35-201ENST00000483942 1338 ntBASIC15.57■□□□□ 0.08
CCDC188H7C350 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CCDC188H7C350 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC188H7C350 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CCDC188H7C350 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC188H7C350 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
CCDC188H7C350 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC188H7C350 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC188H7C350 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CCDC188H7C350 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CCDC188H7C350 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC188H7C350 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.57■□□□□ 0.08
CCDC188H7C350 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC188H7C350 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC188H7C350 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC188H7C350 CICP16-201ENST00000502609 2813 ntBASIC15.57■□□□□ 0.08
CCDC188H7C350 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC188H7C350 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC188H7C350 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms