Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 AC015688.4-201ENST00000580780 1647 ntBASIC13.2□□□□□ -0.3
NPIPB4C9JG80 AC215219.1-201ENST00000400706 1817 ntBASIC13.2□□□□□ -0.3
NPIPB4C9JG80 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NPIPB4C9JG80 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 TCAM1P-207ENST00000485295 1537 ntBASIC13.19□□□□□ -0.3
NPIPB4C9JG80 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.19□□□□□ -0.3
NPIPB4C9JG80 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 AC004945.1-201ENST00000416738 983 ntBASIC13.19□□□□□ -0.3
NPIPB4C9JG80 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 CNN2P8-201ENST00000421872 913 ntBASIC13.19□□□□□ -0.3
NPIPB4C9JG80 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 AL596325.1-201ENST00000563991 1082 ntBASIC13.19□□□□□ -0.3
NPIPB4C9JG80 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 AC008735.3-201ENST00000596646 500 ntBASIC13.19□□□□□ -0.3
NPIPB4C9JG80 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 AC006453.4-201ENST00000636949 1252 ntBASIC13.19□□□□□ -0.3
NPIPB4C9JG80 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 RN7SL832P-201ENST00000607781 1756 ntBASIC13.19□□□□□ -0.3
NPIPB4C9JG80 AC027601.5-201ENST00000624065 2482 ntBASIC13.19□□□□□ -0.3
NPIPB4C9JG80 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
NPIPB4C9JG80 INE2-201ENST00000630399 1874 ntBASIC13.19□□□□□ -0.3
NPIPB4C9JG80 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
NPIPB4C9JG80 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms